Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL8A1P27658 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC6.99□□□□□ -1.29
COL8A1P27658 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC6.99□□□□□ -1.29
COL8A1P27658 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL8A1P27658 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL8A1P27658 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL8A1P27658 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL8A1P27658 ADGRE1-204ENST00000381407 2687 ntTSL 2 BASIC6.99□□□□□ -1.29
COL8A1P27658 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL8A1P27658 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL8A1P27658 IST1-208ENST00000535424 4082 ntTSL 5 BASIC6.99□□□□□ -1.29
COL8A1P27658 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL8A1P27658 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC6.99□□□□□ -1.29
COL8A1P27658 ICE2P1-201ENST00000512800 1849 ntBASIC6.99□□□□□ -1.29
COL8A1P27658 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL8A1P27658 AC008817.1-201ENST00000504215 1562 ntBASIC6.99□□□□□ -1.29
COL8A1P27658 FREM1-203ENST00000380894 2481 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL8A1P27658 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL8A1P27658 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL8A1P27658 ANKRD26P2-201ENST00000445530 1710 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL8A1P27658 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC6.98□□□□□ -1.29
COL8A1P27658 MAATS1-201ENST00000273390 4433 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL8A1P27658 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL8A1P27658 MOSPD1-203ENST00000370783 2364 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL8A1P27658 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC6.98□□□□□ -1.29
COL8A1P27658 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
COL8A1P27658 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC6.98□□□□□ -1.29
COL8A1P27658 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL8A1P27658 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC6.98□□□□□ -1.29
COL8A1P27658 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
COL8A1P27658 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL8A1P27658 USP32P1-201ENST00000341745 3233 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL8A1P27658 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
COL8A1P27658 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL8A1P27658 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC6.98□□□□□ -1.29
COL8A1P27658 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.98□□□□□ -1.29
COL8A1P27658 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
COL8A1P27658 SNORD81.2-201ENST00000365153 76 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL8A1P27658 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.98□□□□□ -1.29
COL8A1P27658 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
COL8A1P27658 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC6.98□□□□□ -1.29
COL8A1P27658 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC6.98□□□□□ -1.29
COL8A1P27658 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.98□□□□□ -1.29
COL8A1P27658 RPL15P1-201ENST00000439981 600 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 AC092170.1-201ENST00000440211 356 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 RBMY3AP-201ENST00000449381 1145 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 RPL7P31-201ENST00000450192 724 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 AL591379.2-201ENST00000450223 397 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.98□□□□□ -1.29
COL8A1P27658 AL121877.1-201ENST00000453704 622 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.98□□□□□ -1.29
COL8A1P27658 RBMY2EP-202ENST00000456360 940 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 AC008620.1-201ENST00000468453 592 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.98□□□□□ -1.29
COL8A1P27658 ARL2BPP5-201ENST00000523141 481 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.98□□□□□ -1.29
COL8A1P27658 OR7E161P-201ENST00000533722 967 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL8A1P27658 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.98□□□□□ -1.29
COL8A1P27658 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.98□□□□□ -1.29
COL8A1P27658 GTF2IP22-201ENST00000554443 182 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 AC007424.1-203ENST00000554613 687 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 CHEK2P2-201ENST00000554701 672 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 AL359212.1-201ENST00000556608 614 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 AC037471.2-201ENST00000564941 598 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 AC105275.2-201ENST00000567907 711 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.98□□□□□ -1.29
COL8A1P27658 AL078623.1-201ENST00000602702 907 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 AC009027.1-201ENST00000604510 479 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 AC113554.1-201ENST00000606284 490 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 AC005332.6-201ENST00000613178 446 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 AC135050.6-202ENST00000613584 392 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.98□□□□□ -1.29
COL8A1P27658 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.98□□□□□ -1.29
COL8A1P27658 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC6.98□□□□□ -1.29
COL8A1P27658 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL8A1P27658 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL8A1P27658 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
COL8A1P27658 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
COL8A1P27658 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL8A1P27658 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL8A1P27658 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.98□□□□□ -1.29
COL8A1P27658 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL8A1P27658 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL8A1P27658 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
COL8A1P27658 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL8A1P27658 CLDN8-201ENST00000399899 2068 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
COL8A1P27658 CYP4A22-203ENST00000371891 2535 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL8A1P27658 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL8A1P27658 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL8A1P27658 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
COL8A1P27658 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL8A1P27658 LNP1-203ENST00000489752 1813 ntTSL 5 BASIC6.97□□□□□ -1.29
COL8A1P27658 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
COL8A1P27658 LINC02239-201ENST00000504339 2290 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL8A1P27658 AC114324.1-201ENST00000504077 3152 ntBASIC6.97□□□□□ -1.29
COL8A1P27658 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms