Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.95□□□□□ -1.3
POLR2AP24928 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
POLR2AP24928 AC099677.3-201ENST00000427081 395 ntBASIC6.95□□□□□ -1.3
POLR2AP24928 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.95□□□□□ -1.3
POLR2AP24928 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
POLR2AP24928 AC087672.1-201ENST00000479876 766 ntBASIC6.95□□□□□ -1.3
POLR2AP24928 MTND1P36-201ENST00000522384 936 ntBASIC6.95□□□□□ -1.3
POLR2AP24928 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.95□□□□□ -1.3
POLR2AP24928 AC067805.1-201ENST00000559344 470 ntBASIC6.95□□□□□ -1.3
POLR2AP24928 AC115989.2-201ENST00000578640 563 ntBASIC6.95□□□□□ -1.3
POLR2AP24928 AL445528.2-201ENST00000620582 470 ntBASIC6.95□□□□□ -1.3
POLR2AP24928 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.95□□□□□ -1.3
POLR2AP24928 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
POLR2AP24928 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
POLR2AP24928 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
POLR2AP24928 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.95□□□□□ -1.3
POLR2AP24928 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC6.94□□□□□ -1.3
POLR2AP24928 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
POLR2AP24928 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
POLR2AP24928 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
POLR2AP24928 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
POLR2AP24928 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
POLR2AP24928 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.94□□□□□ -1.3
POLR2AP24928 AC006058.1-201ENST00000568686 5067 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
POLR2AP24928 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
POLR2AP24928 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
POLR2AP24928 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
POLR2AP24928 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
POLR2AP24928 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
POLR2AP24928 U8.4-201ENST00000363626 134 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 RPL23AP27-201ENST00000415161 451 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 AL590762.4-201ENST00000425885 253 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.94□□□□□ -1.3
POLR2AP24928 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.94□□□□□ -1.3
POLR2AP24928 AC006335.2-201ENST00000437993 330 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.94□□□□□ -1.3
POLR2AP24928 GXYLT1P1-201ENST00000446657 490 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 AL645937.3-201ENST00000453647 936 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.94□□□□□ -1.3
POLR2AP24928 AC115223.1-201ENST00000466377 870 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 SCARNA6.1-201ENST00000516989 238 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 RNA5SP400-201ENST00000517155 111 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 HMGB1P42-201ENST00000532126 553 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.94□□□□□ -1.3
POLR2AP24928 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.94□□□□□ -1.3
POLR2AP24928 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.94□□□□□ -1.3
POLR2AP24928 AC096996.1-201ENST00000563813 325 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
POLR2AP24928 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
POLR2AP24928 AC245128.3-201ENST00000594721 748 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 AC024255.1-201ENST00000614376 102 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 AC009039.2-201ENST00000624524 529 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
POLR2AP24928 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
POLR2AP24928 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
POLR2AP24928 MRRFP1-201ENST00000435941 1675 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 AL157831.2-201ENST00000564681 3095 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
POLR2AP24928 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC6.94□□□□□ -1.3
POLR2AP24928 GTF2IP4-201ENST00000453092 2054 ntBASIC6.94□□□□□ -1.3
POLR2AP24928 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.94□□□□□ -1.3
POLR2AP24928 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
POLR2AP24928 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
POLR2AP24928 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC6.94□□□□□ -1.3
POLR2AP24928 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
POLR2AP24928 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.94□□□□□ -1.3
POLR2AP24928 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.93□□□□□ -1.3
POLR2AP24928 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.93□□□□□ -1.3
POLR2AP24928 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.93□□□□□ -1.3
POLR2AP24928 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
POLR2AP24928 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.93□□□□□ -1.3
POLR2AP24928 RNU11-6P-201ENST00000391127 133 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 AL109941.1-201ENST00000401925 229 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 AC117434.1-201ENST00000419971 836 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.93□□□□□ -1.3
POLR2AP24928 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.93□□□□□ -1.3
POLR2AP24928 CYCSP12-201ENST00000437729 300 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 RPL12P3-201ENST00000440080 396 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.93□□□□□ -1.3
POLR2AP24928 RPL7AP6-201ENST00000477943 801 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 AC022215.1-201ENST00000481770 362 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 RN7SL97P-201ENST00000486780 299 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 PGAM1P13-201ENST00000507497 754 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
POLR2AP24928 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.93□□□□□ -1.3
POLR2AP24928 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
POLR2AP24928 EIF1AXP2-201ENST00000555940 413 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.93□□□□□ -1.3
POLR2AP24928 AC006927.4-201ENST00000639187 543 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
POLR2AP24928 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.93□□□□□ -1.3
POLR2AP24928 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
POLR2AP24928 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
POLR2AP24928 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
POLR2AP24928 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
POLR2AP24928 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC6.93□□□□□ -1.3
POLR2AP24928 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
POLR2AP24928 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms