Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC073488.6-201ENST00000632293 754 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 RPL23AP17-201ENST00000401064 499 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 AL132875.1-201ENST00000403623 949 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 VN1R12P-201ENST00000403778 876 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 AL096829.1-201ENST00000413677 457 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 TRIM60P16-201ENST00000444048 694 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 SLC25A51P1-201ENST00000468432 871 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 OR56A7P-201ENST00000524865 941 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 AC018558.5-201ENST00000565840 952 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 MRPS21P8-201ENST00000569196 235 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 OR1E3-201ENST00000575608 948 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 AC119403.2-201ENST00000590960 598 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 MIR132-201ENST00000591554 101 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 RFPL4AP6-201ENST00000616792 846 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 AC073592.6-201ENST00000624271 415 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 AP001052.1-201ENST00000626421 99 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 CASC19-238ENST00000641523 1558 ntBASIC6.13□□□□□ -1.43
HLA-DPA1P20036 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-DPA1P20036 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 RNA5SP110-201ENST00000362638 115 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 RNU1-134P-201ENST00000362935 165 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AC234781.4-201ENST00000419384 244 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 CDC27P2-201ENST00000425026 1922 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AL390879.1-201ENST00000439143 386 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 RPL5P7-201ENST00000444235 813 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AL162739.1-201ENST00000450606 307 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AC016027.4-201ENST00000450866 277 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 OR52E7P-201ENST00000452394 933 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 PPIAP7-201ENST00000454070 489 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AC091544.1-201ENST00000484702 348 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AC091874.2-201ENST00000505889 720 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AP000620.1-201ENST00000527147 504 ntBASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-DPA1P20036 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms