Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CFTRP13569 COL6A4P1-202ENST00000487147 4317 ntBASIC9.81□□□□□ -0.84
CFTRP13569 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CFTRP13569 AC026951.1-201ENST00000559530 2459 ntBASIC9.81□□□□□ -0.84
CFTRP13569 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC9.81□□□□□ -0.84
CFTRP13569 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CFTRP13569 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CFTRP13569 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
CFTRP13569 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CFTRP13569 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CFTRP13569 MFSD8-216ENST00000641147 4009 ntBASIC9.81□□□□□ -0.84
CFTRP13569 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CFTRP13569 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CFTRP13569 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC9.8□□□□□ -0.84
CFTRP13569 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC9.8□□□□□ -0.84
CFTRP13569 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC9.8□□□□□ -0.84
CFTRP13569 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CFTRP13569 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CFTRP13569 RPL26P29-201ENST00000415623 438 ntBASIC9.8□□□□□ -0.84
CFTRP13569 AL603882.1-201ENST00000463059 681 ntBASIC9.8□□□□□ -0.84
CFTRP13569 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC9.8□□□□□ -0.84
CFTRP13569 ABCA11P-202ENST00000504019 2110 ntBASIC9.8□□□□□ -0.84
CFTRP13569 MGST2-204ENST00000506797 634 ntTSL 2 BASIC9.8□□□□□ -0.84
CFTRP13569 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC9.8□□□□□ -0.84
CFTRP13569 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC9.8□□□□□ -0.84
CFTRP13569 AC004890.3-201ENST00000605566 1095 ntBASIC9.8□□□□□ -0.84
CFTRP13569 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC9.8□□□□□ -0.84
CFTRP13569 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC9.8□□□□□ -0.84
CFTRP13569 HLF-210ENST00000575345 3589 ntTSL 2 BASIC9.8□□□□□ -0.84
CFTRP13569 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
CFTRP13569 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
CFTRP13569 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
CFTRP13569 CASC19-205ENST00000641013 1411 ntBASIC9.8□□□□□ -0.84
CFTRP13569 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
CFTRP13569 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
CFTRP13569 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC9.8□□□□□ -0.84
CFTRP13569 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC9.8□□□□□ -0.84
CFTRP13569 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CFTRP13569 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC9.8□□□□□ -0.84
CFTRP13569 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC9.79□□□□□ -0.84
CFTRP13569 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CFTRP13569 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CFTRP13569 MIR141-201ENST00000384975 95 ntBASIC9.79□□□□□ -0.84
CFTRP13569 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC9.79□□□□□ -0.84
CFTRP13569 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC9.79□□□□□ -0.84
CFTRP13569 AC109462.1-201ENST00000491087 368 ntBASIC9.79□□□□□ -0.84
CFTRP13569 OR5AZ1P-201ENST00000527448 943 ntBASIC9.79□□□□□ -0.84
CFTRP13569 MIR4330-201ENST00000579077 105 ntBASIC9.79□□□□□ -0.84
CFTRP13569 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC9.79□□□□□ -0.84
CFTRP13569 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC9.79□□□□□ -0.84
CFTRP13569 AC105105.5-201ENST00000622635 1294 ntBASIC9.79□□□□□ -0.84
CFTRP13569 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
CFTRP13569 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
CFTRP13569 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CFTRP13569 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
CFTRP13569 CTAGE11P-201ENST00000451540 2353 ntBASIC9.79□□□□□ -0.84
CFTRP13569 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
CFTRP13569 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
CFTRP13569 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CFTRP13569 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CFTRP13569 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC9.79□□□□□ -0.84
CFTRP13569 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CFTRP13569 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CFTRP13569 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
CFTRP13569 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CFTRP13569 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
CFTRP13569 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC9.79□□□□□ -0.84
CFTRP13569 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
CFTRP13569 RNA5SP87-201ENST00000384155 118 ntBASIC9.79□□□□□ -0.84
CFTRP13569 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC9.79□□□□□ -0.84
CFTRP13569 DUTP5-201ENST00000406790 469 ntBASIC9.79□□□□□ -0.84
CFTRP13569 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC9.79□□□□□ -0.84
CFTRP13569 MAL2-207ENST00000522828 603 ntTSL 3 BASIC9.79□□□□□ -0.84
CFTRP13569 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC9.79□□□□□ -0.84
CFTRP13569 AC078878.1-201ENST00000539832 958 ntBASIC9.79□□□□□ -0.84
CFTRP13569 AC137768.1-201ENST00000549998 553 ntBASIC9.79□□□□□ -0.84
CFTRP13569 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC9.79□□□□□ -0.84
CFTRP13569 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC9.79□□□□□ -0.84
CFTRP13569 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CFTRP13569 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CFTRP13569 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CFTRP13569 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CFTRP13569 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
CFTRP13569 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC9.78□□□□□ -0.84
CFTRP13569 ZNF733P-202ENST00000444809 1573 ntBASIC9.78□□□□□ -0.84
CFTRP13569 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
CFTRP13569 AC018809.2-201ENST00000602436 3823 ntBASIC9.78□□□□□ -0.84
CFTRP13569 ZNF101P1-201ENST00000435701 1720 ntBASIC9.78□□□□□ -0.84
CFTRP13569 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
CFTRP13569 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
CFTRP13569 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CFTRP13569 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
CFTRP13569 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC9.78□□□□□ -0.84
CFTRP13569 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CFTRP13569 AP003119.3-201ENST00000566747 4192 ntBASIC9.78□□□□□ -0.84
CFTRP13569 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
CFTRP13569 SNORA11-201ENST00000408789 128 ntBASIC9.78□□□□□ -0.84
CFTRP13569 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC9.78□□□□□ -0.84
CFTRP13569 AL451136.1-201ENST00000435399 325 ntBASIC9.78□□□□□ -0.84
CFTRP13569 YWHABP1-201ENST00000445359 727 ntBASIC9.78□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms