Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
ZIC3O60481 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
ZIC3O60481 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ZIC3O60481 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ZIC3O60481 AL359091.1-201ENST00000449048 1734 ntBASIC5.57□□□□□ -1.52
ZIC3O60481 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.57□□□□□ -1.52
ZIC3O60481 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.57□□□□□ -1.52
ZIC3O60481 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ZIC3O60481 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
ZIC3O60481 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ZIC3O60481 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.56□□□□□ -1.52
ZIC3O60481 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZIC3O60481 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZIC3O60481 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ZIC3O60481 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZIC3O60481 AC024587.1-201ENST00000505925 2157 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZIC3O60481 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZIC3O60481 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZIC3O60481 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZIC3O60481 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZIC3O60481 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.56□□□□□ -1.52
ZIC3O60481 COX6B1P3-201ENST00000312310 260 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 SNORA27.3-201ENST00000364937 134 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 CCNB2P1-201ENST00000399411 1150 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 AMZ2P2-201ENST00000406819 1057 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.56□□□□□ -1.52
ZIC3O60481 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.56□□□□□ -1.52
ZIC3O60481 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ZIC3O60481 RPL35AP31-201ENST00000418340 337 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ZIC3O60481 AC007562.1-201ENST00000421819 517 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.56□□□□□ -1.52
ZIC3O60481 AC023274.2-201ENST00000445264 521 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 MTND2P25-201ENST00000449028 610 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 AC015908.1-201ENST00000478739 476 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 AP002884.1-201ENST00000479691 655 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.56□□□□□ -1.52
ZIC3O60481 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.56□□□□□ -1.52
ZIC3O60481 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.56□□□□□ -1.52
ZIC3O60481 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.56□□□□□ -1.52
ZIC3O60481 AC090115.2-201ENST00000548060 883 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.56□□□□□ -1.52
ZIC3O60481 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.56□□□□□ -1.52
ZIC3O60481 RNU4ATAC-201ENST00000580972 127 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.56□□□□□ -1.52
ZIC3O60481 AC073333.2-201ENST00000603589 769 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 AC092266.1-201ENST00000610958 165 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 AC084824.5-201ENST00000612009 413 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.56□□□□□ -1.52
ZIC3O60481 AL359742.1-201ENST00000622497 540 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.56□□□□□ -1.52
ZIC3O60481 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.56□□□□□ -1.52
ZIC3O60481 AC003992.1-201ENST00000635364 557 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 LYARP1-201ENST00000436977 1501 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.56□□□□□ -1.52
ZIC3O60481 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.56□□□□□ -1.52
ZIC3O60481 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.56□□□□□ -1.52
ZIC3O60481 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.56□□□□□ -1.52
ZIC3O60481 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.56□□□□□ -1.52
ZIC3O60481 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.56□□□□□ -1.52
ZIC3O60481 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
ZIC3O60481 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.56□□□□□ -1.52
ZIC3O60481 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
ZIC3O60481 AC093225.1-201ENST00000506867 1408 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.56□□□□□ -1.52
ZIC3O60481 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZIC3O60481 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.56□□□□□ -1.52
ZIC3O60481 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZIC3O60481 AC087565.3-202ENST00000642085 1603 ntBASIC5.56□□□□□ -1.52
ZIC3O60481 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZIC3O60481 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.55□□□□□ -1.52
ZIC3O60481 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZIC3O60481 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZIC3O60481 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZIC3O60481 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
ZIC3O60481 RNU6-1331P-201ENST00000363658 106 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 RNA5SP433-201ENST00000364491 114 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.55□□□□□ -1.52
ZIC3O60481 MIR130B-202ENST00000385018 82 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 OR7E156P-201ENST00000400303 464 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 SNORA11.5-201ENST00000408163 128 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 AL096829.1-201ENST00000413677 457 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.55□□□□□ -1.52
ZIC3O60481 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.55□□□□□ -1.52
ZIC3O60481 AC073464.3-201ENST00000422564 712 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 AC007568.1-201ENST00000422912 471 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.55□□□□□ -1.52
ZIC3O60481 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.55□□□□□ -1.52
ZIC3O60481 UBE2V1P6-201ENST00000430840 422 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.55□□□□□ -1.52
ZIC3O60481 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.55□□□□□ -1.52
ZIC3O60481 RPL6P30-201ENST00000443382 862 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 TXNP2-201ENST00000443918 295 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 AL512593.1-201ENST00000444758 779 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.55□□□□□ -1.52
ZIC3O60481 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.55□□□□□ -1.52
ZIC3O60481 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms