Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC007562.1-201ENST00000421819 517 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 AC007568.1-201ENST00000422912 471 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SMAD6O43541 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.17□□□□□ -1.42
SMAD6O43541 AC023274.2-201ENST00000445264 521 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.17□□□□□ -1.42
SMAD6O43541 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.17□□□□□ -1.42
SMAD6O43541 AL022319.1-201ENST00000458183 1167 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 RPL17P2-201ENST00000491913 451 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 AC006499.4-201ENST00000510947 694 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.17□□□□□ -1.42
SMAD6O43541 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.17□□□□□ -1.42
SMAD6O43541 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.17□□□□□ -1.42
SMAD6O43541 NANOGNBP2-201ENST00000544753 553 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.17□□□□□ -1.42
SMAD6O43541 AC007956.1-201ENST00000555623 542 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SMAD6O43541 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.17□□□□□ -1.42
SMAD6O43541 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.17□□□□□ -1.42
SMAD6O43541 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.17□□□□□ -1.42
SMAD6O43541 BNIP3P39-201ENST00000601077 554 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 AC007423.1-201ENST00000605009 627 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 AC012467.1-201ENST00000607740 256 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 AC108673.3-201ENST00000609183 335 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 AL365181.4-201ENST00000609800 547 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 MIR6809-201ENST00000612189 116 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 MIR6861-201ENST00000618657 64 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.17□□□□□ -1.42
SMAD6O43541 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SMAD6O43541 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
SMAD6O43541 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.17□□□□□ -1.42
SMAD6O43541 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
SMAD6O43541 CASC19-238ENST00000641523 1558 ntBASIC6.17□□□□□ -1.42
SMAD6O43541 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.17□□□□□ -1.42
SMAD6O43541 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.17□□□□□ -1.42
SMAD6O43541 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
SMAD6O43541 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.17□□□□□ -1.42
SMAD6O43541 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SMAD6O43541 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SMAD6O43541 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.16□□□□□ -1.42
SMAD6O43541 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SMAD6O43541 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SMAD6O43541 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.16□□□□□ -1.42
SMAD6O43541 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SMAD6O43541 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SMAD6O43541 MTCO1P46-201ENST00000451639 1491 ntBASIC6.16□□□□□ -1.42
SMAD6O43541 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SMAD6O43541 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SMAD6O43541 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SMAD6O43541 TMSB4XP2-201ENST00000335179 210 ntBASIC6.16□□□□□ -1.42
SMAD6O43541 SNORD8-201ENST00000363915 110 ntBASIC6.16□□□□□ -1.42
SMAD6O43541 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SMAD6O43541 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.16□□□□□ -1.42
SMAD6O43541 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.16□□□□□ -1.42
SMAD6O43541 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.16□□□□□ -1.42
SMAD6O43541 RPL12P12-201ENST00000424633 501 ntBASIC6.16□□□□□ -1.42
SMAD6O43541 TRIM60P16-201ENST00000444048 694 ntBASIC6.16□□□□□ -1.42
SMAD6O43541 AC005077.1-201ENST00000449226 375 ntBASIC6.16□□□□□ -1.42
SMAD6O43541 HLA-DPA3-207ENST00000454398 229 ntBASIC6.16□□□□□ -1.42
SMAD6O43541 TAAR4P-201ENST00000454843 1039 ntBASIC6.16□□□□□ -1.42
SMAD6O43541 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.16□□□□□ -1.42
SMAD6O43541 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
SMAD6O43541 NPM1P21-201ENST00000513394 762 ntBASIC6.16□□□□□ -1.42
SMAD6O43541 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.16□□□□□ -1.42
SMAD6O43541 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.16□□□□□ -1.42
SMAD6O43541 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.16□□□□□ -1.42
SMAD6O43541 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.16□□□□□ -1.42
SMAD6O43541 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SMAD6O43541 AP004609.2-201ENST00000532177 190 ntBASIC6.16□□□□□ -1.42
SMAD6O43541 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SMAD6O43541 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SMAD6O43541 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SMAD6O43541 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.16□□□□□ -1.42
SMAD6O43541 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.16□□□□□ -1.42
SMAD6O43541 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.16□□□□□ -1.42
SMAD6O43541 RPA2P1-201ENST00000556557 721 ntBASIC6.16□□□□□ -1.42
SMAD6O43541 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.16□□□□□ -1.42
SMAD6O43541 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.16□□□□□ -1.42
SMAD6O43541 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SMAD6O43541 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.16□□□□□ -1.42
SMAD6O43541 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.16□□□□□ -1.42
SMAD6O43541 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
SMAD6O43541 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SMAD6O43541 FO681491.1-202ENST00000623392 737 ntBASIC6.16□□□□□ -1.42
SMAD6O43541 AC022400.9-201ENST00000623633 273 ntBASIC6.16□□□□□ -1.42
SMAD6O43541 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SMAD6O43541 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SMAD6O43541 CCNT2P1-201ENST00000423082 1315 ntBASIC6.16□□□□□ -1.42
SMAD6O43541 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SMAD6O43541 AL355377.1-201ENST00000621125 1653 ntBASIC6.16□□□□□ -1.42
SMAD6O43541 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
SMAD6O43541 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SMAD6O43541 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SMAD6O43541 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SMAD6O43541 AC007114.2-201ENST00000576014 4281 ntBASIC6.16□□□□□ -1.42
SMAD6O43541 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.16□□□□□ -1.42
SMAD6O43541 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SMAD6O43541 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SMAD6O43541 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SMAD6O43541 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms