Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 ULK4P3-201ENST00000563895 440 ntBASIC6.42□□□□□ -1.38
SHISA3A0PJX4 ULK4P1-202ENST00000565174 503 ntBASIC6.42□□□□□ -1.38
SHISA3A0PJX4 AC138907.7-202ENST00000565347 540 ntTSL 4 BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 AC141257.2-201ENST00000569199 540 ntTSL 5 BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 AL049840.5-201ENST00000602827 552 ntBASIC6.42□□□□□ -1.38
SHISA3A0PJX4 AC083899.3-201ENST00000603413 594 ntBASIC6.42□□□□□ -1.38
SHISA3A0PJX4 AL021808.1-201ENST00000604325 1117 ntBASIC6.42□□□□□ -1.38
SHISA3A0PJX4 AC004890.3-201ENST00000605566 1095 ntBASIC6.42□□□□□ -1.38
SHISA3A0PJX4 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 AC004948.1-201ENST00000609858 672 ntBASIC6.42□□□□□ -1.38
SHISA3A0PJX4 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 U4.5-201ENST00000617137 123 ntBASIC6.42□□□□□ -1.38
SHISA3A0PJX4 AL136981.2-201ENST00000617319 734 ntBASIC6.42□□□□□ -1.38
SHISA3A0PJX4 AP004607.9-201ENST00000618202 316 ntBASIC6.42□□□□□ -1.38
SHISA3A0PJX4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 AP000851.2-201ENST00000629499 721 ntTSL 3 BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 MIR3120-201ENST00000636555 81 ntBASIC6.42□□□□□ -1.38
SHISA3A0PJX4 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 AC090771.1-201ENST00000585803 1618 ntBASIC6.42□□□□□ -1.38
SHISA3A0PJX4 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHISA3A0PJX4 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC006116.1-201ENST00000587908 2171 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 NAMPTP1-201ENST00000440465 2514 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AL353743.4-201ENST00000422653 1547 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AP000766.1-201ENST00000561746 4140 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC016716.1-201ENST00000265882 708 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 OR4G2P-201ENST00000328113 903 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 OR14I1-201ENST00000342623 936 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 RNU1-24P-201ENST00000364285 165 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 RN7SKP225-201ENST00000410405 352 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 TPT1P2-201ENST00000413105 503 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 RPL36P18-201ENST00000419316 318 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 ISCA1P1-201ENST00000426679 387 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC010975.2-201ENST00000427781 588 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 YWHAEP5-201ENST00000431545 765 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 CNOT7P2-201ENST00000441051 832 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 RPL4P2-201ENST00000447259 1282 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 TPT1P7-201ENST00000458300 517 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 RN7SL434P-201ENST00000495872 271 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 CCDC11P1-201ENST00000503137 1162 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 MYL12BP2-201ENST00000503948 512 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC096754.1-201ENST00000508904 818 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 GTF2F2P1-201ENST00000511083 675 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 IGKV2-29-201ENST00000521304 372 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 SNRPCP14-201ENST00000524498 205 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms