Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC093816.1-201ENST00000515076 913 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 RNU6-334P-201ENST00000517072 102 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC121758.1-202ENST00000556917 658 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 HMGN2P47-201ENST00000559378 272 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 MIR4433B-201ENST00000581329 102 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 BNIP3P39-201ENST00000601077 554 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AL589765.6-201ENST00000601909 549 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC073137.1-201ENST00000605636 634 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AL359091.2-201ENST00000609303 556 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC110792.4-201ENST00000609843 298 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 MIR8084-201ENST00000614105 89 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 uc_338.29-201ENST00000615099 168 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AL121936.2-201ENST00000641935 662 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 FAM32BP-201ENST00000344033 333 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 MRRF-207ENST00000373729 870 ntTSL 3 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 RNU6-729P-201ENST00000384399 107 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 MIR620-201ENST00000385232 95 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 HMGB1P10-201ENST00000395823 563 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 PRELID1P1-201ENST00000403549 660 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 RNU2-18P-201ENST00000411224 162 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 AL360013.1-201ENST00000419031 858 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 RPL23AP85-201ENST00000421838 433 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 MTND2P9-201ENST00000422293 931 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 AL354692.1-201ENST00000423044 315 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 AL160175.1-201ENST00000428124 247 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 NDUFA5P10-201ENST00000432147 357 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 AC015983.1-201ENST00000441577 373 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 RNFT1P2-201ENST00000443064 757 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 AC097359.1-201ENST00000447946 463 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 CALM1P2-201ENST00000452941 448 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 CLIC4P1-201ENST00000453177 535 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 AC079080.1-201ENST00000479841 822 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 AC091544.1-201ENST00000484702 348 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 RPEP1-201ENST00000504507 658 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 AC112518.2-201ENST00000508565 425 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 IGHV3-63-201ENST00000518422 341 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 OR4A41P-201ENST00000533053 928 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 AL078623.1-201ENST00000602702 907 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 BNIP3P35-201ENST00000604530 490 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 AC005828.7-201ENST00000607331 556 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 AC007683.2-201ENST00000624681 714 ntBASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL4A3BPQ9Y5P4 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms