Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RCL1Q9Y2P8 QRSL1P3-201ENST00000552666 1316 ntBASIC4.87□□□□□ -1.63
RCL1Q9Y2P8 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.87□□□□□ -1.63
RCL1Q9Y2P8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RCL1Q9Y2P8 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
RCL1Q9Y2P8 AL161912.4-201ENST00000623889 2468 ntBASIC4.87□□□□□ -1.63
RCL1Q9Y2P8 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
RCL1Q9Y2P8 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RCL1Q9Y2P8 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RCL1Q9Y2P8 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.87□□□□□ -1.63
RCL1Q9Y2P8 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RCL1Q9Y2P8 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 MAPK10-328ENST00000641553 4009 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AC007842.1-201ENST00000597336 2039 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 RPL11P3-201ENST00000395256 523 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AL117344.1-201ENST00000407196 616 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 RN7SKP117-201ENST00000410175 264 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 RN7SKP279-201ENST00000411383 298 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 OR52S1P-201ENST00000427016 937 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 CRIP1P1-201ENST00000427567 185 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 RARRES2P3-201ENST00000457739 473 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 RN7SL197P-201ENST00000466981 299 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AC134698.1-201ENST00000511619 643 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 LSM1P2-201ENST00000604911 322 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AC023206.1-201ENST00000605824 298 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AL121985.3-201ENST00000620690 523 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AP000473.2-201ENST00000602659 1537 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 AL513548.1-201ENST00000562904 1724 ntBASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RCL1Q9Y2P8 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 GDA-209ENST00000545168 5362 ntTSL 2 BASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 OR10R3P-201ENST00000361688 942 ntBASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 RNA5SP231-201ENST00000410496 138 ntBASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 AC024937.2-201ENST00000411669 1242 ntBASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 AL356968.2-201ENST00000412769 1257 ntBASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 MTND4LP21-201ENST00000415303 295 ntBASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 CDC42P6-201ENST00000421246 576 ntBASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 AC002127.1-201ENST00000421305 225 ntBASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 REREP1Y-201ENST00000422655 198 ntBASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 AL034379.1-201ENST00000423216 253 ntBASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 AC244033.1-201ENST00000426826 870 ntBASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.85□□□□□ -1.63
RCL1Q9Y2P8 AC096632.2-201ENST00000438139 1239 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms