Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 GNL2P1-201ENST00000451274 2190 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 RNU11-6P-201ENST00000391127 133 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AC007562.1-201ENST00000421819 517 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AC092651.1-201ENST00000426110 312 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AC016027.5-201ENST00000427227 210 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AC096775.1-201ENST00000437724 448 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AL353662.1-201ENST00000439099 327 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AC023274.2-201ENST00000445264 521 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AC016027.4-201ENST00000450866 277 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 ACA64.4-201ENST00000459070 127 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AL157777.1-201ENST00000468100 304 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AL645933.2-201ENST00000606743 1207 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.7□□□□□ -1.5
CCDC88CQ9P219 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC88CQ9P219 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 NPM1P36-201ENST00000415681 835 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 RPS14P4-201ENST00000415880 418 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 RPL12P12-201ENST00000424633 501 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AC002504.1-201ENST00000438281 691 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 TRIM60P16-201ENST00000444048 694 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 SNORA81.2-201ENST00000516868 170 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AP005119.1-201ENST00000580956 292 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 SNORD1C-201ENST00000363315 78 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AC087752.1-201ENST00000391360 558 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 OR2W4P-201ENST00000406496 926 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 MTND6P12-201ENST00000428247 522 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 EEF1B2P6-201ENST00000445713 673 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 SETP21-201ENST00000514799 892 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AP003396.4-201ENST00000527574 265 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AP000648.1-201ENST00000529682 397 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AC007956.1-201ENST00000555623 542 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AL031601.1-201ENST00000605702 394 ntBASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC88CQ9P219 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms