Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AL132875.1-201ENST00000403623 949 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 NPM1P38-201ENST00000403835 865 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 BX276092.6-201ENST00000430476 250 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 GAPDHP19-201ENST00000431768 1005 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 AL022324.2-201ENST00000434827 780 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 AC096775.1-201ENST00000437724 448 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 AC234771.2-201ENST00000445718 597 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 AC073072.2-201ENST00000447425 348 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 PPIAP32-201ENST00000449940 472 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 BX276092.8-201ENST00000455722 250 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 RN7SL393P-201ENST00000463588 296 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 RPL12P30-201ENST00000488389 499 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 ZNF519P4-201ENST00000514008 125 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 CR383658.1-201ENST00000514609 734 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 AL080312.2-201ENST00000613001 630 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 AL445670.1-201ENST00000618889 801 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 LINC01613-201ENST00000561476 2780 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.58□□□□□ -1.52
VAPAQ9P0L0 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.58□□□□□ -1.52
VAPAQ9P0L0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AP001284.1-201ENST00000528393 2118 ntBASIC5.57□□□□□ -1.52
VAPAQ9P0L0 MFSD8-239ENST00000641590 2479 ntBASIC5.57□□□□□ -1.52
VAPAQ9P0L0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 FBXL21-201ENST00000297158 1305 ntBASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AC092451.3-201ENST00000625067 1343 ntBASIC5.57□□□□□ -1.52
VAPAQ9P0L0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AL591135.1-201ENST00000401578 5914 ntBASIC5.57□□□□□ -1.52
VAPAQ9P0L0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 RN7SKP78-201ENST00000364711 318 ntBASIC5.57□□□□□ -1.52
VAPAQ9P0L0 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AC087752.1-201ENST00000391360 558 ntBASIC5.57□□□□□ -1.52
VAPAQ9P0L0 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AC099670.2-201ENST00000435130 321 ntBASIC5.57□□□□□ -1.52
VAPAQ9P0L0 RPS7P3-201ENST00000443360 580 ntBASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 FTLP8-201ENST00000446770 267 ntBASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AC004129.2-201ENST00000457229 287 ntBASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AC022730.1-201ENST00000473114 568 ntBASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AC006539.1-201ENST00000481419 501 ntBASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 OR8Q1P-201ENST00000526467 655 ntBASIC5.57□□□□□ -1.52
VAPAQ9P0L0 OR4A42P-201ENST00000531397 938 ntBASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 MIR6883-201ENST00000614952 78 ntBASIC5.57□□□□□ -1.52
VAPAQ9P0L0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VAPAQ9P0L0 SAMM50P1-201ENST00000455403 1399 ntBASIC5.56□□□□□ -1.52
VAPAQ9P0L0 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 SNRPEP6-201ENST00000407465 277 ntBASIC5.56□□□□□ -1.52
VAPAQ9P0L0 RPS14P4-201ENST00000415880 418 ntBASIC5.56□□□□□ -1.52
VAPAQ9P0L0 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 MRPS21P2-201ENST00000424704 264 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms