Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC011352.2-201ENST00000514574 1016 ntBASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AC096661.1-201ENST00000515870 822 ntBASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AC090888.1-201ENST00000561335 1141 ntBASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 SNORA70D-201ENST00000578836 135 ntBASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AC103987.3-201ENST00000582071 292 ntBASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AL133507.1-201ENST00000605269 557 ntBASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AC099785.1-201ENST00000605697 437 ntBASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AC004492.1-201ENST00000607036 742 ntBASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AL352984.2-201ENST00000611153 546 ntBASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AC092106.3-201ENST00000611308 722 ntBASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 HULC.1-201ENST00000612720 240 ntBASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 OR7A1P-202ENST00000641542 1158 ntBASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AL512329.1-201ENST00000404600 1592 ntBASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 OLMALINC-203ENST00000641087 3779 ntBASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.08□□□□□ -1.44
PARPBPQ9NWS1 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AC007993.1-201ENST00000621298 2430 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 RNA5SP152-201ENST00000365184 110 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 RNU6-1242P-201ENST00000391052 103 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 RPL9P21-201ENST00000392269 505 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 HMGB1P13-201ENST00000406019 642 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 SEPT2P1-201ENST00000419651 180 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AL672212.1-201ENST00000422246 400 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AL139415.1-201ENST00000424862 352 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 PRELID3BP10-201ENST00000431957 584 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 SNRPBP1-201ENST00000443634 282 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 MEF2AP1-201ENST00000454867 863 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 BZW1P1-201ENST00000454901 1240 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AC002075.1-201ENST00000457396 676 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 NPM1P29-201ENST00000483112 803 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 RN7SL267P-201ENST00000485107 261 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 OR5H3P-201ENST00000502817 919 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AC107401.1-201ENST00000503426 685 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AC010374.1-201ENST00000503762 1237 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AC093325.1-201ENST00000508378 326 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 SCARNA11.1-201ENST00000516918 132 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AP006587.5-201ENST00000532033 739 ntBASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.07□□□□□ -1.44
PARPBPQ9NWS1 AL591767.3-201ENST00000554632 525 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms