Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC140479.2-201ENST00000421567 3130 ntBASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
BLOC1S4Q9NUP1 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 OR10R3P-201ENST00000361688 942 ntBASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 RNU6-697P-201ENST00000363348 107 ntBASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 RPL23AP17-201ENST00000401064 499 ntBASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 RNA5SP431-201ENST00000410312 120 ntBASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 RPS7P8-201ENST00000418311 581 ntBASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 RFPL4AP3-201ENST00000515267 345 ntBASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 AC084121.1-201ENST00000533882 835 ntBASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 AC092332.1-201ENST00000563684 829 ntBASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 AC004801.6-201ENST00000616571 978 ntBASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 AL591926.1-201ENST00000620542 217 ntBASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 AC010168.2-201ENST00000562691 5428 ntBASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
BLOC1S4Q9NUP1 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.33
BLOC1S4Q9NUP1 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
BLOC1S4Q9NUP1 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
BLOC1S4Q9NUP1 AC011503.2-201ENST00000594230 1500 ntBASIC6.71□□□□□ -1.33
BLOC1S4Q9NUP1 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
BLOC1S4Q9NUP1 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 AC130360.2-201ENST00000533477 1556 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 SNORA70.9-201ENST00000384370 135 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 CDY17P-201ENST00000414121 1282 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 RPS26P38-201ENST00000414476 348 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 RAB9AP4-201ENST00000415230 609 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 NMD3P2-201ENST00000421815 761 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 AL034379.1-201ENST00000423216 253 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 CDY8P-201ENST00000428380 1279 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 AL365220.1-201ENST00000432923 399 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 TRIM60P16-201ENST00000444048 694 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 CDY20P-201ENST00000447528 1279 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 ACA64.4-201ENST00000459070 127 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 RN7SL269P-201ENST00000467795 305 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 RPL5P12-201ENST00000477071 851 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 RN7SKP248-201ENST00000516278 305 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 RNA5SP473-201ENST00000516402 125 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 AL355974.3-201ENST00000617383 467 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 CASC19-274ENST00000642018 970 ntBASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
BLOC1S4Q9NUP1 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms