Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 HSPA8P18-201ENST00000439846 1928 ntBASIC5.54□□□□□ -1.52
CHD8Q9HCK8 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 SNORA51.8-201ENST00000384234 132 ntBASIC5.54□□□□□ -1.52
CHD8Q9HCK8 SNORA37-201ENST00000384504 129 ntBASIC5.54□□□□□ -1.52
CHD8Q9HCK8 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.54□□□□□ -1.52
CHD8Q9HCK8 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 AP002981.1-201ENST00000517692 975 ntBASIC5.54□□□□□ -1.52
CHD8Q9HCK8 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 AC027229.1-201ENST00000583887 253 ntBASIC5.54□□□□□ -1.52
CHD8Q9HCK8 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 AL450472.3-201ENST00000615578 367 ntBASIC5.54□□□□□ -1.52
CHD8Q9HCK8 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 AC024651.2-201ENST00000562480 2098 ntBASIC5.53□□□□□ -1.52
CHD8Q9HCK8 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 RPL23P2-201ENST00000320371 421 ntBASIC5.53□□□□□ -1.52
CHD8Q9HCK8 RN7SKP29-201ENST00000410957 272 ntBASIC5.53□□□□□ -1.52
CHD8Q9HCK8 AC096537.2-201ENST00000413707 714 ntBASIC5.53□□□□□ -1.52
CHD8Q9HCK8 AC019050.1-201ENST00000418508 492 ntBASIC5.53□□□□□ -1.52
CHD8Q9HCK8 AC091390.3-201ENST00000426478 338 ntBASIC5.53□□□□□ -1.52
CHD8Q9HCK8 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 AC009120.1-201ENST00000493458 473 ntBASIC5.53□□□□□ -1.52
CHD8Q9HCK8 SNRPCP2-201ENST00000504370 475 ntBASIC5.53□□□□□ -1.52
CHD8Q9HCK8 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 AC005084.1-201ENST00000605160 304 ntBASIC5.53□□□□□ -1.52
CHD8Q9HCK8 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 AC012360.3-201ENST00000610036 3449 ntBASIC5.53□□□□□ -1.52
CHD8Q9HCK8 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 AC005294.1-201ENST00000355509 281 ntBASIC5.53□□□□□ -1.52
CHD8Q9HCK8 Y_RNA.333-201ENST00000365274 102 ntBASIC5.53□□□□□ -1.52
CHD8Q9HCK8 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 AURKAPS2-201ENST00000454983 333 ntBASIC5.53□□□□□ -1.52
CHD8Q9HCK8 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 RN7SL591P-201ENST00000496150 292 ntBASIC5.53□□□□□ -1.52
CHD8Q9HCK8 IGHV3-57-201ENST00000520143 280 ntBASIC5.53□□□□□ -1.52
CHD8Q9HCK8 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 ULK4P2-202ENST00000564187 492 ntBASIC5.53□□□□□ -1.52
CHD8Q9HCK8 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 LINC02035-201ENST00000610128 5476 ntBASIC5.53□□□□□ -1.52
CHD8Q9HCK8 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.53□□□□□ -1.52
CHD8Q9HCK8 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 AL596244.1-201ENST00000567068 3779 ntBASIC5.52□□□□□ -1.53
CHD8Q9HCK8 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.52□□□□□ -1.53
CHD8Q9HCK8 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 GTF2IP4-201ENST00000453092 2054 ntBASIC5.52□□□□□ -1.53
CHD8Q9HCK8 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 CTAGE11P-201ENST00000451540 2353 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms