Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SLFN13-210ENST00000534689 3058 ntTSL 2 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 CALCOCO2-201ENST00000258947 3682 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 CSTF1-201ENST00000217109 4290 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 PLG-202ENST00000308192 2741 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 NAT10-210ENST00000615292 3329 ntTSL 5 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 THADA-202ENST00000402360 2974 ntTSL 5 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 EIF3EP2-201ENST00000423042 1814 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 Y_RNA.142-201ENST00000363491 102 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 SNORA77.2-201ENST00000408571 112 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 TPT1P2-201ENST00000413105 503 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 RPL5P34-201ENST00000426545 891 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC113607.1-201ENST00000427019 589 ntTSL 4 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC008072.1-201ENST00000434254 824 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC009518.3-201ENST00000438972 253 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 ARL5AP3-201ENST00000439327 386 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AL583843.1-201ENST00000456070 346 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 RPS3AP49-201ENST00000472161 790 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 FTH1P4-201ENST00000480365 553 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC111000.3-201ENST00000508057 576 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 RNU6-123P-201ENST00000516163 102 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 SEC11B-201ENST00000518383 499 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 RN7SL473P-201ENST00000580341 299 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AL445264.1-201ENST00000621719 171 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC211433.3-201ENST00000623770 375 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 NDUFS1-203ENST00000432169 2080 ntTSL 2 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC127024.8-201ENST00000623719 2094 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC011297.1-201ENST00000620503 2110 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 DCAF8-203ENST00000368074 3824 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 ABHD18-201ENST00000388795 5450 ntTSL 5 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 BDNF-216ENST00000532997 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 ZNF849P-201ENST00000594711 1566 ntBASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 CEP57-202ENST00000325542 3178 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 MAPK10-378ENST00000642009 2463 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
COL25A1Q9BXS0 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AL353588.1-201ENST00000505802 3513 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 LRRC40-201ENST00000370952 2884 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 MR1-205ENST00000434571 7479 ntTSL 5 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 ZNF726-201ENST00000322487 2330 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 TCTN3-203ENST00000371217 2514 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 RNA5SP382-201ENST00000363355 112 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 Y_RNA.138-201ENST00000363462 102 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 RN7SKP36-201ENST00000363997 312 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 RNU6-1318P-201ENST00000365389 103 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AL035419.1-201ENST00000397037 564 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 ATF1P1-201ENST00000406040 927 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 RPS7P8-201ENST00000418311 581 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 USP9YP36-201ENST00000424581 829 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 USP9YP16-201ENST00000430287 407 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms