Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 AC132219.2-201ENST00000624416 2327 ntBASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC8.01□□□□□ -1.13
TRAIPQ9BWF2 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TRAIPQ9BWF2 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC8□□□□□ -1.13
TRAIPQ9BWF2 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TRAIPQ9BWF2 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TRAIPQ9BWF2 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TRAIPQ9BWF2 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TRAIPQ9BWF2 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
TRAIPQ9BWF2 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 RN7SKP232-201ENST00000410170 290 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 RNU4-72P-201ENST00000410754 173 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 AL157698.1-201ENST00000415190 1011 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 USP9YP31-201ENST00000431405 881 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 RPL14P5-201ENST00000436474 730 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC084878.1-201ENST00000480555 648 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC130366.1-201ENST00000526505 1192 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 AP001646.2-201ENST00000528645 1156 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 SSU72P6-201ENST00000532644 488 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 ELOCP32-201ENST00000548625 324 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
TRAIPQ9BWF2 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC090751.1-201ENST00000566966 267 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC105275.2-201ENST00000567907 711 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC091932.1-201ENST00000569381 427 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 MIR4666A-201ENST00000580160 79 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC100767.2-201ENST00000604840 693 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC022001.1-201ENST00000605193 268 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC069545.1-201ENST00000605671 358 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 AL021707.7-201ENST00000607991 416 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 AL451049.1-201ENST00000608672 497 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC027271.1-201ENST00000610270 610 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC009090.3-201ENST00000616553 565 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC005840.5-201ENST00000619166 599 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC8□□□□□ -1.13
TRAIPQ9BWF2 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 SGO1P1-201ENST00000603525 1447 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TRAIPQ9BWF2 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC8□□□□□ -1.13
TRAIPQ9BWF2 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TRAIPQ9BWF2 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
TRAIPQ9BWF2 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC8□□□□□ -1.13
TRAIPQ9BWF2 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TRAIPQ9BWF2 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 AC090132.1-201ENST00000524071 1480 ntBASIC8□□□□□ -1.13
TRAIPQ9BWF2 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC8□□□□□ -1.13
TRAIPQ9BWF2 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
TRAIPQ9BWF2 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC8□□□□□ -1.13
TRAIPQ9BWF2 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 SNORA51.12-201ENST00000384448 134 ntBASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 BX119904.4-201ENST00000424402 301 ntBASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AL161626.1-201ENST00000441480 490 ntBASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC7.99□□□□□ -1.13
TRAIPQ9BWF2 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms