Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 MIR1193-201ENST00000408109 78 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 SNORA11F-201ENST00000408237 128 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 RPL18P10-201ENST00000425606 538 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 OR13C1P-201ENST00000457612 963 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 AC068522.1-201ENST00000482895 345 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 LAPTM4BP2-201ENST00000604542 446 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 SNORD91A-202ENST00000609620 191 ntBASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CSMD1Q96PZ7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC096921.2-201ENST00000561507 1916 ntBASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 LINC00654-201ENST00000379053 6113 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 RNA5SP30-201ENST00000365552 115 ntBASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 MIR640-201ENST00000385086 96 ntBASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC022034.3-201ENST00000471393 478 ntBASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC010343.2-201ENST00000510162 224 ntBASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC078899.1-201ENST00000521432 1185 ntBASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC008033.2-201ENST00000542626 177 ntBASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 BLZF2P-201ENST00000553776 1130 ntBASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 GARSP1-201ENST00000570895 719 ntBASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC012616.1-201ENST00000600294 197 ntBASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC009831.5-201ENST00000624000 3189 ntBASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 BRD7P6-201ENST00000431406 1860 ntBASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC127381.1-201ENST00000555979 939 ntBASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 RBM22P12-201ENST00000567098 1255 ntBASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC069307.1-201ENST00000602820 447 ntBASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.82□□□□□ -1.64
CSMD1Q96PZ7 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 RNU6-398P-201ENST00000384143 109 ntBASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 RMRPP5-201ENST00000411156 267 ntBASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 AC109635.6-201ENST00000525487 1113 ntBASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 AC015818.6-201ENST00000584274 634 ntBASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 WBP1LP8-201ENST00000617401 327 ntBASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 ABCA8-203ENST00000430352 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 Z98755.1-201ENST00000407015 1384 ntBASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 MYO5A-213ENST00000613858 12139 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 RN7SKP227-201ENST00000364445 330 ntBASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 AC092570.3-201ENST00000420113 693 ntBASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.81□□□□□ -1.64
CSMD1Q96PZ7 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms