Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SNX18P24-201ENST00000505249 671 ntBASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 AC018797.1-201ENST00000510791 255 ntBASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 ZNF519P4-201ENST00000514008 125 ntBASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 SETP12-201ENST00000514068 805 ntBASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 AC005363.1-201ENST00000530779 351 ntBASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 AC083837.1-201ENST00000565297 2994 ntBASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 MIR4502-201ENST00000580432 81 ntBASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 RN7SL261P-201ENST00000613441 282 ntBASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 TMCC1P1-201ENST00000518897 1980 ntBASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
CHMP4CQ96CF2 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.52□□□□□ -1.2
CHMP4CQ96CF2 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.52□□□□□ -1.2
CHMP4CQ96CF2 CASC19-246ENST00000641625 1606 ntBASIC7.52□□□□□ -1.2
CHMP4CQ96CF2 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
CHMP4CQ96CF2 AC006600.2-201ENST00000624834 2506 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AL137058.3-201ENST00000624531 3099 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 MIR621-201ENST00000384919 96 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 U3.43-201ENST00000410734 213 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AC002127.1-201ENST00000421305 225 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 MTND4LP14-201ENST00000429447 288 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 MED28P4-201ENST00000433137 572 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 LDHAP2-201ENST00000437325 985 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AL022237.1-201ENST00000446663 358 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 MAST4-IT1-201ENST00000514241 658 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 COX6B1P4-201ENST00000519826 484 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 OR10D4P-201ENST00000525892 951 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AP001804.1-201ENST00000526868 919 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 NPIPB14P-203ENST00000532298 987 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AC008055.1-201ENST00000547032 609 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AC009120.3-201ENST00000563335 499 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AL078601.3-201ENST00000573303 535 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AC134669.1-201ENST00000581275 672 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AC092953.2-201ENST00000608000 699 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AC024255.1-201ENST00000614376 102 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 uc_338.31-201ENST00000615595 186 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AC005899.7-201ENST00000618199 588 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AC105749.1-201ENST00000631338 2008 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 AC079753.1-201ENST00000623243 3868 ntBASIC7.52□□□□□ -1.21
CHMP4CQ96CF2 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
CHMP4CQ96CF2 RPL31P11-201ENST00000426558 1558 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms