Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC4Q92889 AL359976.1-201ENST00000418655 3528 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC4Q92889 SSXP3-201ENST00000442971 1300 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC4Q92889 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC4Q92889 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.2□□□□□ -1.26
ERCC4Q92889 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
ERCC4Q92889 GTF2IP4-201ENST00000453092 2054 ntBASIC7.2□□□□□ -1.26
ERCC4Q92889 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC4Q92889 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC4Q92889 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC4Q92889 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC4Q92889 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC4Q92889 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC4Q92889 AC106754.1-201ENST00000562632 1513 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC4Q92889 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
ERCC4Q92889 SNORD8-201ENST00000363915 110 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 FDPSP5-201ENST00000399474 1057 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
ERCC4Q92889 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.19□□□□□ -1.26
ERCC4Q92889 MARK2P12-201ENST00000420129 585 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 RCC2P2-201ENST00000422174 918 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC4Q92889 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.19□□□□□ -1.26
ERCC4Q92889 AC103563.5-201ENST00000455643 364 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 SNX18P26-201ENST00000458433 740 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC4Q92889 AC090589.1-201ENST00000473109 362 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC4Q92889 RN7SL655P-201ENST00000486087 298 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.19□□□□□ -1.26
ERCC4Q92889 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC4Q92889 RN7SKP196-201ENST00000516267 345 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 RN7SKP5-201ENST00000517045 272 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC4Q92889 AP002004.1-206ENST00000532441 876 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.19□□□□□ -1.26
ERCC4Q92889 AC139103.1-201ENST00000534696 1030 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC4Q92889 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC4Q92889 AP000619.2-201ENST00000546014 969 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 AC074029.2-201ENST00000551045 634 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 YWHAZP1-201ENST00000556286 722 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 HMGN2P47-201ENST00000559378 272 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 AC010287.1-201ENST00000566916 357 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.19□□□□□ -1.26
ERCC4Q92889 AC008507.2-201ENST00000588402 1176 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC4Q92889 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC4Q92889 AC022001.1-201ENST00000605193 268 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 AP001033.2-201ENST00000609701 1003 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 AL138960.1-201ENST00000613838 513 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 AC018926.1-201ENST00000616335 435 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 U1.41-201ENST00000617626 165 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 MIR6849-201ENST00000618543 69 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
ERCC4Q92889 AC009039.2-201ENST00000624524 529 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC4Q92889 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC4Q92889 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC4Q92889 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC4Q92889 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC4Q92889 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC4Q92889 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC4Q92889 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC4Q92889 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.19□□□□□ -1.26
ERCC4Q92889 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
ERCC4Q92889 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC4Q92889 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC4Q92889 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.19□□□□□ -1.26
ERCC4Q92889 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC4Q92889 AC090220.1-201ENST00000593078 1699 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 AL121768.1-201ENST00000613917 2544 ntBASIC7.19□□□□□ -1.26
ERCC4Q92889 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.19□□□□□ -1.26
ERCC4Q92889 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC4Q92889 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC4Q92889 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.18□□□□□ -1.26
ERCC4Q92889 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC4Q92889 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC4Q92889 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
ERCC4Q92889 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC4Q92889 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC4Q92889 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.18□□□□□ -1.26
ERCC4Q92889 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC4Q92889 RN7SKP237-201ENST00000364663 301 ntBASIC7.18□□□□□ -1.26
ERCC4Q92889 RNU6-40P-201ENST00000384254 107 ntBASIC7.18□□□□□ -1.26
ERCC4Q92889 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
ERCC4Q92889 RN7SKP281-201ENST00000410472 352 ntBASIC7.18□□□□□ -1.26
ERCC4Q92889 RN7SKP161-201ENST00000411110 305 ntBASIC7.18□□□□□ -1.26
ERCC4Q92889 SSR1P2-201ENST00000415208 787 ntBASIC7.18□□□□□ -1.26
ERCC4Q92889 RPL3P11-201ENST00000434028 1146 ntBASIC7.18□□□□□ -1.26
ERCC4Q92889 AC003989.1-201ENST00000434569 565 ntBASIC7.18□□□□□ -1.26
ERCC4Q92889 ELOCP3-201ENST00000439303 348 ntBASIC7.18□□□□□ -1.26
ERCC4Q92889 RRM2P4-201ENST00000441721 562 ntBASIC7.18□□□□□ -1.26
ERCC4Q92889 MTATP6P26-201ENST00000445926 662 ntBASIC7.18□□□□□ -1.26
ERCC4Q92889 RPS27AP3-201ENST00000453803 454 ntBASIC7.18□□□□□ -1.26
ERCC4Q92889 RN7SL221P-201ENST00000466190 281 ntBASIC7.18□□□□□ -1.26
ERCC4Q92889 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms