Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RNU6-84P-201ENST00000607737 102 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 PSMA6P1-201ENST00000400275 741 ntBASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 AL121977.1-201ENST00000401636 979 ntBASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 AL132875.1-201ENST00000403623 949 ntBASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 AL590399.2-201ENST00000427536 309 ntBASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 CUBNP2-201ENST00000443534 1139 ntBASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 RPS7P10-201ENST00000464254 603 ntBASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 RPL12P30-201ENST00000488389 499 ntBASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 RNA5SP434-201ENST00000516647 121 ntBASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 AL049779.3-201ENST00000557141 606 ntBASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 AP001267.4-201ENST00000602598 545 ntBASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 NDUFB9P1-201ENST00000604683 510 ntBASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 AC007342.5-201ENST00000571340 2142 ntBASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 AC092070.2-203ENST00000598377 3644 ntBASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLHC1Q8NHS4 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 LINC01613-201ENST00000561476 2780 ntBASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 AC005224.3-201ENST00000584683 2140 ntBASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 RNA5SP110-201ENST00000362638 115 ntBASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 RNU105B-201ENST00000364478 208 ntBASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 AL133260.1-201ENST00000405720 405 ntBASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 RN7SKP166-201ENST00000410812 305 ntBASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 MRPS21P2-201ENST00000424704 264 ntBASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 AC013410.1-201ENST00000436223 1232 ntBASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 AL590004.3-202ENST00000445883 451 ntBASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 NPIPB14P-203ENST00000532298 987 ntBASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 NPM1P42-201ENST00000560329 862 ntBASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 WBP1LP12-201ENST00000604449 331 ntBASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 MIR6774-201ENST00000614651 70 ntBASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 AC012676.3-201ENST00000614983 479 ntBASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLHC1Q8NHS4 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms