Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 RN7SL314P-201ENST00000490735 292 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 LYRM7-203ENST00000510516 604 ntTSL 2 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 ZNF767P-206ENST00000513792 565 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 MTCO1P49-201ENST00000523429 802 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 AP003084.1-201ENST00000524828 742 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 AC087373.1-201ENST00000524920 491 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 HNRNPA1P76-201ENST00000529475 848 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 BRWD1P2-201ENST00000546823 340 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 GTF2IP22-201ENST00000554443 182 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 AL137191.1-201ENST00000554921 814 ntTSL 2 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 AC091489.2-201ENST00000566263 604 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 ANP32BP1-202ENST00000568553 737 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 RN7SL134P-201ENST00000579756 303 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 MIR4644-201ENST00000579929 84 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 RN7SL176P-201ENST00000580352 264 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 AC005154.1-223ENST00000584372 547 ntTSL 5 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 PSME3-213ENST00000592169 826 ntTSL 3 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 ZNF677-208ENST00000599012 796 ntTSL 3 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 AP001425.1-202ENST00000605450 1063 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 AC140113.3-201ENST00000605663 199 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 AL021707.6-201ENST00000609212 491 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 AC138649.2-201ENST00000615886 705 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 Metazoa_SRP.160-201ENST00000622203 277 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 AC095031.1-201ENST00000623685 672 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 Z92544.3-201ENST00000624747 417 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 RPS9-213ENST00000626547 476 ntTSL 2 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 RPL23AP49-202ENST00000638439 1138 ntTSL 5 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 OR51V1-202ENST00000641270 948 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 CCT4P2-201ENST00000233836 1548 ntBASIC4.46□□□□□ -1.7
SVIPQ8NHG7 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SVIPQ8NHG7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 SLC24A5-201ENST00000341459 1897 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 CR381670.1-201ENST00000624291 1693 ntBASIC4.45□□□□□ -1.7
SVIPQ8NHG7 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.45□□□□□ -1.7
SVIPQ8NHG7 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 FAU-201ENST00000279259 461 ntTSL 2 BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 OR3A3-201ENST00000291231 966 ntBASIC4.45□□□□□ -1.7
SVIPQ8NHG7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 MIR326-201ENST00000362220 95 ntBASIC4.45□□□□□ -1.7
SVIPQ8NHG7 U3.7-201ENST00000363668 216 ntBASIC4.45□□□□□ -1.7
SVIPQ8NHG7 MYOF-203ENST00000371488 763 ntTSL 2 BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 DEFB109C-201ENST00000382575 264 ntBASIC4.45□□□□□ -1.7
SVIPQ8NHG7 DEFB109B-201ENST00000382656 264 ntBASIC4.45□□□□□ -1.7
SVIPQ8NHG7 MIR199B-201ENST00000384849 110 ntBASIC4.45□□□□□ -1.7
SVIPQ8NHG7 MT-TH-201ENST00000387441 69 ntBASIC4.45□□□□□ -1.7
SVIPQ8NHG7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 TRAV8-2-201ENST00000390434 566 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 ISY1-202ENST00000393292 988 ntTSL 5 BASIC4.45□□□□□ -1.7
SVIPQ8NHG7 ALDOAP2-201ENST00000398050 1076 ntBASIC4.45□□□□□ -1.7
SVIPQ8NHG7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms