Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 MLH1-222ENST00000539477 2366 ntTSL 2 BASIC8.46□□□□□ -1.06
PACS2Q86VP3 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PACS2Q86VP3 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 TSSK4-201ENST00000287913 1257 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 IL4-202ENST00000350025 414 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 RNU6-359P-201ENST00000365466 108 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 S100A8-201ENST00000368732 495 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 SNORA7.3-201ENST00000384186 139 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 RNU6-1300P-201ENST00000391046 108 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 SNORA74B-201ENST00000391100 201 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 AL162578.1-201ENST00000406202 378 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 RPL23AP47-201ENST00000408017 460 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 RNU6-373P-201ENST00000411247 98 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 ING4-203ENST00000412586 741 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 SLC25A26-203ENST00000413054 1096 ntTSL 5 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC013404.1-201ENST00000413068 249 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 MED15P4-201ENST00000417579 393 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 ING4-204ENST00000423703 602 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 FO393418.1-201ENST00000424761 510 ntTSL 4 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC009501.2-201ENST00000428700 312 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AL158819.1-202ENST00000440645 447 ntTSL 2 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AL365356.2-201ENST00000441526 196 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 ING4-206ENST00000444704 678 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 CECR9-201ENST00000453421 199 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC092610.1-201ENST00000454916 373 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 AL133480.2-201ENST00000456723 487 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 CREB3L2-205ENST00000458726 776 ntTSL 3 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 RNU6-1208P-201ENST00000459588 107 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 RN7SL496P-201ENST00000470372 290 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 ACPP-203ENST00000475741 1242 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC130651.1-201ENST00000482912 598 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC084017.1-201ENST00000483240 860 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 MTND1P3-201ENST00000484956 952 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 GABRP-207ENST00000519598 1284 ntTSL 5 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AP000790.1-201ENST00000528891 737 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 OR7E8P-201ENST00000532847 1000 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 AMN1-207ENST00000536761 1025 ntTSL 2 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC023511.1-201ENST00000549055 571 ntTSL 3 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 MIR3150B-201ENST00000580142 86 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 MIR3918-201ENST00000581555 93 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC068020.1-201ENST00000594215 661 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC130352.1-201ENST00000602979 661 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC004840.2-201ENST00000603368 285 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 PLS3-AS1-201ENST00000606397 521 ntTSL 4 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AL513479.1-201ENST00000611376 585 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 MIR6083-201ENST00000612737 106 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC091925.1-201ENST00000623204 462 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 NELFE-214ENST00000625905 111 ntTSL 5 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 LINC01835-203ENST00000639800 567 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 C14orf2-203ENST00000553430 1659 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 OR5BR1P-201ENST00000524992 1330 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC018647.1-201ENST00000432866 1414 ntTSL 5 BASIC8.45□□□□□ -1.06
PACS2Q86VP3 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PACS2Q86VP3 AC024560.2-201ENST00000507981 1497 ntBASIC8.45□□□□□ -1.06
PACS2Q86VP3 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PACS2Q86VP3 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC8.44□□□□□ -1.06
PACS2Q86VP3 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
PACS2Q86VP3 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PACS2Q86VP3 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
PACS2Q86VP3 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PACS2Q86VP3 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC8.44□□□□□ -1.06
PACS2Q86VP3 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC8.44□□□□□ -1.06
PACS2Q86VP3 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PACS2Q86VP3 ZSCAN9-204ENST00000527436 2062 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PACS2Q86VP3 PARP1P1-201ENST00000413631 3026 ntBASIC8.44□□□□□ -1.06
PACS2Q86VP3 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PACS2Q86VP3 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PACS2Q86VP3 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms