Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RN7SL350P-201ENST00000492591 299 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 AC008868.1-201ENST00000509786 737 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 SCARNA11.1-201ENST00000516918 132 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 AP002004.1-206ENST00000532441 876 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHFQ7M4L6 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 NPIPB1P-202ENST00000588786 828 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 AL671309.1-201ENST00000603750 544 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 BNIP3P19-201ENST00000605397 577 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 AC012511.1-201ENST00000608140 449 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 AC093388.1-201ENST00000609166 430 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 AC084824.5-201ENST00000612009 413 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHFQ7M4L6 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 AC027506.1-201ENST00000621395 198 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHFQ7M4L6 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHFQ7M4L6 AC004023.1-201ENST00000561473 1744 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHFQ7M4L6 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
SHFQ7M4L6 AC087565.3-202ENST00000642085 1603 ntBASIC5.59□□□□□ -1.52
SHFQ7M4L6 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
SHFQ7M4L6 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.59□□□□□ -1.52
SHFQ7M4L6 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.59□□□□□ -1.52
SHFQ7M4L6 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.59□□□□□ -1.52
SHFQ7M4L6 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.59□□□□□ -1.52
SHFQ7M4L6 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.59□□□□□ -1.52
SHFQ7M4L6 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHFQ7M4L6 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHFQ7M4L6 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHFQ7M4L6 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 RNU1-5P-201ENST00000362684 144 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 AL353133.1-201ENST00000407695 401 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 MTND2P15-201ENST00000418575 892 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 ARAFP1-201ENST00000422172 605 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 AL354707.3-201ENST00000427308 331 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 AC083862.1-201ENST00000427378 1242 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 RPL5P2-201ENST00000429598 854 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 TXNP2-201ENST00000443918 295 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 MTND2P30-201ENST00000456663 382 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 RN7SL714P-201ENST00000487050 298 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 AC104629.1-201ENST00000494226 508 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHFQ7M4L6 AC092865.1-201ENST00000544395 1023 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 AC009729.1-201ENST00000548873 1133 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHFQ7M4L6 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 MIR378H-201ENST00000579966 83 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 RPL29P33-201ENST00000587474 316 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 AC020916.2-201ENST00000591242 360 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 AC004890.3-201ENST00000605566 1095 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 SNORA74.4-201ENST00000607595 199 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHFQ7M4L6 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 AC074276.2-201ENST00000619891 348 ntBASIC5.58□□□□□ -1.52
SHFQ7M4L6 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHFQ7M4L6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHFQ7M4L6 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHFQ7M4L6 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.58□□□□□ -1.52
SHFQ7M4L6 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
SHFQ7M4L6 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.57□□□□□ -1.52
SHFQ7M4L6 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHFQ7M4L6 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SHFQ7M4L6 AL137141.1-201ENST00000624622 4836 ntBASIC5.57□□□□□ -1.52
SHFQ7M4L6 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
SHFQ7M4L6 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHFQ7M4L6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.57□□□□□ -1.52
SHFQ7M4L6 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHFQ7M4L6 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms