Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
CCDC141Q6ZP82 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
CCDC141Q6ZP82 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.71□□□□□ -1.02
CCDC141Q6ZP82 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 U3.2-201ENST00000362981 210 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AC019205.1-201ENST00000421830 730 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 ACA64.4-201ENST00000459070 127 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AC005532.2-201ENST00000467154 373 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AC002456.2-201ENST00000509356 380 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AC021146.10-201ENST00000515628 706 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 RN7SKP98-201ENST00000517070 156 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AC096996.1-201ENST00000563813 325 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 FKBP1AP1-201ENST00000594588 318 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AC063977.5-201ENST00000601044 974 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 MIR130A-201ENST00000385274 89 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 RPL35AP24-201ENST00000413846 330 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AC023141.8-201ENST00000442554 208 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 VDAC2P4-201ENST00000452925 711 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 RN7SL222P-201ENST00000476452 299 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 RN7SL826P-201ENST00000479724 288 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AC006539.1-201ENST00000481419 501 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 RN7SL570P-201ENST00000484405 292 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AC008953.1-201ENST00000497334 318 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AC024558.1-201ENST00000505008 528 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 RBM22P12-201ENST00000567098 1255 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 MIR4700-201ENST00000578311 74 ntBASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
CCDC141Q6ZP82 AL391262.1-201ENST00000556558 1992 ntBASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 OFD1P17-201ENST00000437639 3018 ntBASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 CAST-222ENST00000508579 1758 ntTSL 2 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 IARS-213ENST00000627121 4587 ntTSL 5 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 RNU1-19P-201ENST00000363306 165 ntBASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 FIGN-202ENST00000409634 746 ntTSL 5 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 HMGA1P8-201ENST00000414130 321 ntBASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 AC006335.2-201ENST00000437993 330 ntBASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 AC093763.2-201ENST00000505334 1223 ntBASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 AC096754.1-201ENST00000508904 818 ntBASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 RN7SKP288-201ENST00000516227 268 ntBASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 AC007342.5-201ENST00000571340 2142 ntBASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 CYCSP1-201ENST00000604815 315 ntBASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 AL359513.1-201ENST00000614364 557 ntBASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 MIR7155-201ENST00000615925 56 ntBASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 AF117829.2-201ENST00000619538 361 ntBASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
CCDC141Q6ZP82 PABPC1P8-201ENST00000452851 2086 ntBASIC8.68□□□□□ -1.02
CCDC141Q6ZP82 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CCDC141Q6ZP82 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
CCDC141Q6ZP82 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CCDC141Q6ZP82 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC8.68□□□□□ -1.02
CCDC141Q6ZP82 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
CCDC141Q6ZP82 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
CCDC141Q6ZP82 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms