Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC093815.1-201ENST00000508637 280 ntBASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 AC005000.1-201ENST00000536192 288 ntBASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 NDUFB9P1-201ENST00000604683 510 ntBASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 AC012676.3-201ENST00000614983 479 ntBASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 AL031658.2-201ENST00000616850 651 ntBASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 AL391597.1-201ENST00000618707 694 ntBASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 AL158062.1-201ENST00000619632 745 ntBASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 AC003992.1-201ENST00000635364 557 ntBASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 AC010325.3-201ENST00000641084 394 ntBASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 AP000432.2-201ENST00000624164 2048 ntBASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
NHLRC1Q6VVB1 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 OR10AB1P-202ENST00000641219 1686 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 RPL11P4-201ENST00000332269 436 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 RNA5SP346-201ENST00000363541 121 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 SNORA43.1-201ENST00000364863 140 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC117434.1-201ENST00000419971 836 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 NME1P1-201ENST00000420914 382 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 RCC2P2-201ENST00000422174 918 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AL590004.3-202ENST00000445883 451 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 RAB28P3-201ENST00000448325 597 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 HIGD1AP16-201ENST00000450986 258 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 RPL31P53-201ENST00000457065 348 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 snoU13.29-201ENST00000459370 104 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC073594.1-201ENST00000462065 364 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC091544.1-201ENST00000484702 348 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 RPL34P33-201ENST00000486062 334 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC095052.1-201ENST00000509955 863 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 RN7SKP34-201ENST00000516142 244 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 MIR4701-201ENST00000583094 63 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 NPM1P45-201ENST00000583151 559 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC005479.3-201ENST00000602790 431 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 MIR6811-201ENST00000620409 58 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC007603.3-201ENST00000636915 979 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC116667.2-201ENST00000641075 823 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms