Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 AC018690.1-201ENST00000608144 626 ntBASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 AC079395.2-201ENST00000610982 737 ntBASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 AL137067.2-201ENST00000621202 131 ntBASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 CR383656.5-201ENST00000547616 1340 ntBASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LYSMD4Q5XG99 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 Z93929.1-201ENST00000418200 1475 ntBASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 AC127070.3-201ENST00000503695 3263 ntBASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 AL391262.1-201ENST00000556558 1992 ntBASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 SELENOWP1-201ENST00000322792 252 ntBASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 FAM32BP-201ENST00000344033 333 ntBASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 RNA5SP46-201ENST00000362370 120 ntBASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 AC073909.1-201ENST00000447112 999 ntBASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 NENFP3-201ENST00000503735 313 ntBASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 IGHV1-14-201ENST00000523391 241 ntBASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 AL035661.1-201ENST00000620459 1144 ntBASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 MIR6730-201ENST00000622213 67 ntBASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 TMEM75-201ENST00000624314 2165 ntBASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 AC006213.6-201ENST00000623722 4179 ntBASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 CCNT2P1-201ENST00000423082 1315 ntBASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LYSMD4Q5XG99 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.96□□□□□ -1.45
LYSMD4Q5XG99 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
LYSMD4Q5XG99 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
LYSMD4Q5XG99 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
LYSMD4Q5XG99 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
LYSMD4Q5XG99 AL161901.1-201ENST00000624954 3425 ntBASIC5.96□□□□□ -1.45
LYSMD4Q5XG99 AC006600.2-201ENST00000624834 2506 ntBASIC5.96□□□□□ -1.45
LYSMD4Q5XG99 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
LYSMD4Q5XG99 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
LYSMD4Q5XG99 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 SNORA74A-201ENST00000364089 198 ntBASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 RNU11-6P-201ENST00000391127 133 ntBASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 MIR937-201ENST00000401271 86 ntBASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 HMGB1P20-201ENST00000402555 677 ntBASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 KIF4CP-201ENST00000422742 1279 ntBASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 TPTE2P1-204ENST00000435256 593 ntBASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AL627308.1-201ENST00000435693 821 ntBASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms