Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.94□□□□□ -1.46
RAE1P78406 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
RAE1P78406 AC005725.1-201ENST00000577346 2607 ntBASIC5.94□□□□□ -1.46
RAE1P78406 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RAE1P78406 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.93□□□□□ -1.46
RAE1P78406 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.93□□□□□ -1.46
RAE1P78406 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RAE1P78406 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RAE1P78406 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RAE1P78406 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.93□□□□□ -1.46
RAE1P78406 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.93□□□□□ -1.46
RAE1P78406 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
RAE1P78406 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
RAE1P78406 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RAE1P78406 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
RAE1P78406 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RAE1P78406 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RAE1P78406 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
RAE1P78406 SNORA43.1-201ENST00000364863 140 ntBASIC5.93□□□□□ -1.46
RAE1P78406 RNA5SP77-201ENST00000365394 120 ntBASIC5.93□□□□□ -1.46
RAE1P78406 RNU6-650P-201ENST00000365658 111 ntBASIC5.93□□□□□ -1.46
RAE1P78406 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.93□□□□□ -1.46
RAE1P78406 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RAE1P78406 RN7SKP151-201ENST00000410230 316 ntBASIC5.93□□□□□ -1.46
RAE1P78406 RNU4-64P-201ENST00000410795 131 ntBASIC5.93□□□□□ -1.46
RAE1P78406 AC069282.1-201ENST00000411911 526 ntBASIC5.93□□□□□ -1.46
RAE1P78406 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.93□□□□□ -1.46
RAE1P78406 AC015977.1-201ENST00000418887 292 ntBASIC5.93□□□□□ -1.46
RAE1P78406 AL360013.1-201ENST00000419031 858 ntBASIC5.93□□□□□ -1.46
RAE1P78406 AC092570.3-201ENST00000420113 693 ntBASIC5.93□□□□□ -1.46
RAE1P78406 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.93□□□□□ -1.46
RAE1P78406 OSTCP4-201ENST00000424397 449 ntBASIC5.93□□□□□ -1.46
RAE1P78406 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.93□□□□□ -1.46
RAE1P78406 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.93□□□□□ -1.46
RAE1P78406 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.93□□□□□ -1.46
RAE1P78406 AL512637.2-201ENST00000431287 1256 ntBASIC5.93□□□□□ -1.46
RAE1P78406 MRPL50P1-201ENST00000431951 384 ntBASIC5.93□□□□□ -1.46
RAE1P78406 SOCS5P1-201ENST00000440415 949 ntBASIC5.93□□□□□ -1.46
RAE1P78406 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.93□□□□□ -1.46
RAE1P78406 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.93□□□□□ -1.46
RAE1P78406 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.93□□□□□ -1.46
RAE1P78406 AL606517.1-201ENST00000446914 387 ntBASIC5.93□□□□□ -1.46
RAE1P78406 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.93□□□□□ -1.46
RAE1P78406 AL133351.3-201ENST00000454998 193 ntBASIC5.93□□□□□ -1.46
RAE1P78406 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.93□□□□□ -1.46
RAE1P78406 AC112187.1-201ENST00000455837 479 ntBASIC5.93□□□□□ -1.46
RAE1P78406 AK4P6-201ENST00000505168 528 ntBASIC5.93□□□□□ -1.46
RAE1P78406 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.93□□□□□ -1.46
RAE1P78406 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.93□□□□□ -1.46
RAE1P78406 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.93□□□□□ -1.46
RAE1P78406 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.93□□□□□ -1.46
RAE1P78406 OR6M2P-201ENST00000529831 871 ntBASIC5.93□□□□□ -1.46
RAE1P78406 AC124891.1-201ENST00000536322 519 ntBASIC5.93□□□□□ -1.46
RAE1P78406 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.93□□□□□ -1.46
RAE1P78406 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.93□□□□□ -1.46
RAE1P78406 AC092865.1-201ENST00000544395 1023 ntBASIC5.93□□□□□ -1.46
RAE1P78406 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.93□□□□□ -1.46
RAE1P78406 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.93□□□□□ -1.46
RAE1P78406 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.93□□□□□ -1.46
RAE1P78406 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
RAE1P78406 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.93□□□□□ -1.46
RAE1P78406 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.93□□□□□ -1.46
RAE1P78406 DYNLL1P1-201ENST00000595442 269 ntBASIC5.93□□□□□ -1.46
RAE1P78406 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.93□□□□□ -1.46
RAE1P78406 AL158050.2-201ENST00000605336 568 ntBASIC5.93□□□□□ -1.46
RAE1P78406 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.93□□□□□ -1.46
RAE1P78406 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.93□□□□□ -1.46
RAE1P78406 AL356118.1-201ENST00000635272 1078 ntBASIC5.93□□□□□ -1.46
RAE1P78406 MAPK10-350ENST00000641777 965 ntBASIC5.93□□□□□ -1.46
RAE1P78406 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RAE1P78406 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RAE1P78406 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RAE1P78406 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RAE1P78406 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RAE1P78406 CCNT2P1-201ENST00000423082 1315 ntBASIC5.93□□□□□ -1.46
RAE1P78406 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
RAE1P78406 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.93□□□□□ -1.46
RAE1P78406 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RAE1P78406 AC005261.6-201ENST00000623072 1387 ntBASIC5.93□□□□□ -1.46
RAE1P78406 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAE1P78406 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RAE1P78406 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAE1P78406 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.92□□□□□ -1.46
RAE1P78406 CASC19-246ENST00000641625 1606 ntBASIC5.92□□□□□ -1.46
RAE1P78406 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.92□□□□□ -1.46
RAE1P78406 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAE1P78406 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.92□□□□□ -1.46
RAE1P78406 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAE1P78406 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.92□□□□□ -1.46
RAE1P78406 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAE1P78406 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.92□□□□□ -1.46
RAE1P78406 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
RAE1P78406 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAE1P78406 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
RAE1P78406 AC010168.2-201ENST00000562691 5428 ntBASIC5.92□□□□□ -1.46
RAE1P78406 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RAE1P78406 RNU1-49P-201ENST00000363468 159 ntBASIC5.92□□□□□ -1.46
RAE1P78406 RNU6-792P-201ENST00000363490 107 ntBASIC5.92□□□□□ -1.46
RAE1P78406 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RAE1P78406 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms