Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS1BP61024 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS1BP61024 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CKS1BP61024 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
CKS1BP61024 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC4.27□□□□□ -1.73
CKS1BP61024 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS1BP61024 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CKS1BP61024 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CKS1BP61024 AC091305.2-201ENST00000624049 1576 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS1BP61024 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC4.26□□□□□ -1.73
CKS1BP61024 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CKS1BP61024 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CKS1BP61024 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CKS1BP61024 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CKS1BP61024 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
CKS1BP61024 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.26□□□□□ -1.73
CKS1BP61024 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CKS1BP61024 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CKS1BP61024 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CKS1BP61024 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CKS1BP61024 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CKS1BP61024 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CKS1BP61024 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CKS1BP61024 RN7SKP130-201ENST00000364924 301 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.26□□□□□ -1.73
CKS1BP61024 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CKS1BP61024 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC4.26□□□□□ -1.73
CKS1BP61024 LDHAP5-201ENST00000394996 622 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CKS1BP61024 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC4.26□□□□□ -1.73
CKS1BP61024 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC4.26□□□□□ -1.73
CKS1BP61024 CLIC4P3-201ENST00000422221 752 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 AL596268.1-201ENST00000427910 1048 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CKS1BP61024 AC099670.2-201ENST00000435130 321 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 PHBP4-201ENST00000437447 837 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC4.26□□□□□ -1.73
CKS1BP61024 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS1BP61024 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC4.26□□□□□ -1.73
CKS1BP61024 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CKS1BP61024 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC4.26□□□□□ -1.73
CKS1BP61024 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC4.26□□□□□ -1.73
CKS1BP61024 RNA5SP103-201ENST00000459503 118 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 RN7SL221P-201ENST00000466190 281 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC4.26□□□□□ -1.73
CKS1BP61024 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS1BP61024 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.26□□□□□ -1.73
CKS1BP61024 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS1BP61024 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS1BP61024 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC4.26□□□□□ -1.73
CKS1BP61024 AC107952.1-201ENST00000524200 376 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS1BP61024 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC4.26□□□□□ -1.73
CKS1BP61024 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS1BP61024 FRG2IP-201ENST00000563581 781 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 AC090651.1-201ENST00000567865 634 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS1BP61024 RN7SL689P-201ENST00000577215 297 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 MIR4685-201ENST00000578185 69 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 HNRNPA3P9-201ENST00000604913 979 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 AC096553.1-201ENST00000605169 829 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 AC019257.2-201ENST00000605539 497 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 AC026333.4-201ENST00000613543 544 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC4.26□□□□□ -1.73
CKS1BP61024 IGKV2OR2-10-201ENST00000613976 311 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS1BP61024 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC4.26□□□□□ -1.73
CKS1BP61024 AC022726.2-201ENST00000634673 547 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
CKS1BP61024 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CKS1BP61024 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.26□□□□□ -1.73
CKS1BP61024 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CKS1BP61024 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CKS1BP61024 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CKS1BP61024 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CKS1BP61024 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CKS1BP61024 MTCO1P22-201ENST00000604619 1360 ntBASIC4.26□□□□□ -1.73
CKS1BP61024 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.26□□□□□ -1.73
CKS1BP61024 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.26□□□□□ -1.73
CKS1BP61024 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CKS1BP61024 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CKS1BP61024 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CKS1BP61024 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CKS1BP61024 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CKS1BP61024 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CKS1BP61024 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CKS1BP61024 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.25□□□□□ -1.73
CKS1BP61024 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 TUBBP10-201ENST00000427668 1301 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CKS1BP61024 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CKS1BP61024 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC4.25□□□□□ -1.73
CKS1BP61024 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CKS1BP61024 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CKS1BP61024 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms