Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AP003396.4-201ENST00000527574 265 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 RPA2P3-201ENST00000533268 770 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.34□□□□□ -1.23
RHBDL3P58872 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.34□□□□□ -1.23
RHBDL3P58872 AC008521.2-201ENST00000591021 259 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 AC067838.1-201ENST00000606064 577 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 AL592494.3-201ENST00000609485 464 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 AC096708.4-201ENST00000620563 552 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 AC020763.5-201ENST00000623298 430 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RHBDL3P58872 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RHBDL3P58872 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.34□□□□□ -1.23
RHBDL3P58872 Z93929.1-201ENST00000418200 1475 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
RHBDL3P58872 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
RHBDL3P58872 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RHBDL3P58872 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
RHBDL3P58872 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.34□□□□□ -1.23
RHBDL3P58872 PARP4P1-201ENST00000435945 2337 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 AL356317.1-201ENST00000396110 1436 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.34□□□□□ -1.24
RHBDL3P58872 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
RHBDL3P58872 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.34□□□□□ -1.24
RHBDL3P58872 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
RHBDL3P58872 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.33□□□□□ -1.24
RHBDL3P58872 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.33□□□□□ -1.24
RHBDL3P58872 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
RHBDL3P58872 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RHBDL3P58872 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.33□□□□□ -1.24
RHBDL3P58872 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RHBDL3P58872 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RHBDL3P58872 AL589826.1-201ENST00000340697 249 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 AC023490.2-201ENST00000359859 470 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.33□□□□□ -1.24
RHBDL3P58872 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RHBDL3P58872 MIR433-201ENST00000384837 93 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 RNU11-6P-201ENST00000391127 133 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 AL096829.1-201ENST00000413677 457 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.33□□□□□ -1.24
RHBDL3P58872 RPL35AP3-201ENST00000414680 288 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RHBDL3P58872 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC7.33□□□□□ -1.24
RHBDL3P58872 BUD31P2-201ENST00000449374 300 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.33□□□□□ -1.24
RHBDL3P58872 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.33□□□□□ -1.24
RHBDL3P58872 AC114781.3-201ENST00000512083 142 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 SNORD46.2-201ENST00000516021 102 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 RN7SKP34-201ENST00000516142 244 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.33□□□□□ -1.24
RHBDL3P58872 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.33□□□□□ -1.24
RHBDL3P58872 DUX4L52-201ENST00000549363 777 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.33□□□□□ -1.24
RHBDL3P58872 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.33□□□□□ -1.24
RHBDL3P58872 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.33□□□□□ -1.24
RHBDL3P58872 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.33□□□□□ -1.24
RHBDL3P58872 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.33□□□□□ -1.24
RHBDL3P58872 NPIPB1P-202ENST00000588786 828 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC7.33□□□□□ -1.24
RHBDL3P58872 AL645933.2-201ENST00000606743 1207 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC7.33□□□□□ -1.24
RHBDL3P58872 AC015922.4-201ENST00000612568 690 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.33□□□□□ -1.24
RHBDL3P58872 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.33□□□□□ -1.24
RHBDL3P58872 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.33□□□□□ -1.24
RHBDL3P58872 AL137067.2-201ENST00000621202 131 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 AL450226.2-201ENST00000622913 439 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 AC103703.1-201ENST00000634783 663 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.33□□□□□ -1.24
RHBDL3P58872 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RHBDL3P58872 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
RHBDL3P58872 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
RHBDL3P58872 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.33□□□□□ -1.24
RHBDL3P58872 AC024587.1-201ENST00000505925 2157 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.33□□□□□ -1.24
RHBDL3P58872 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RHBDL3P58872 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RHBDL3P58872 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RHBDL3P58872 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.33□□□□□ -1.24
RHBDL3P58872 AP001541.1-201ENST00000623322 1904 ntBASIC7.33□□□□□ -1.24
RHBDL3P58872 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RHBDL3P58872 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RHBDL3P58872 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.32□□□□□ -1.24
RHBDL3P58872 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
RHBDL3P58872 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RHBDL3P58872 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.32□□□□□ -1.24
RHBDL3P58872 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
RHBDL3P58872 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RHBDL3P58872 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
RHBDL3P58872 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RHBDL3P58872 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RHBDL3P58872 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RHBDL3P58872 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.32□□□□□ -1.24
RHBDL3P58872 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.32□□□□□ -1.24
RHBDL3P58872 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.32□□□□□ -1.24
RHBDL3P58872 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RHBDL3P58872 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.32□□□□□ -1.24
RHBDL3P58872 MTND6P12-201ENST00000428247 522 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms