Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CDH4P55283 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.15□□□□□ -1.42
CDH4P55283 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.15□□□□□ -1.42
CDH4P55283 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDH4P55283 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.15□□□□□ -1.42
CDH4P55283 RNA5SP273-201ENST00000362484 113 ntBASIC6.15□□□□□ -1.42
CDH4P55283 RN7SKP77-201ENST00000363261 353 ntBASIC6.15□□□□□ -1.42
CDH4P55283 MIR1282-201ENST00000408865 101 ntBASIC6.15□□□□□ -1.42
CDH4P55283 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.15□□□□□ -1.42
CDH4P55283 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH4P55283 KIF4CP-201ENST00000422742 1279 ntBASIC6.15□□□□□ -1.42
CDH4P55283 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH4P55283 AL731534.1-201ENST00000434711 269 ntBASIC6.15□□□□□ -1.42
CDH4P55283 EIF5AP4-201ENST00000441206 465 ntBASIC6.15□□□□□ -1.42
CDH4P55283 BMS1P10-201ENST00000443754 1120 ntBASIC6.15□□□□□ -1.42
CDH4P55283 AL162739.1-201ENST00000450606 307 ntBASIC6.15□□□□□ -1.42
CDH4P55283 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.15□□□□□ -1.42
CDH4P55283 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CDH4P55283 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.15□□□□□ -1.42
CDH4P55283 AL035690.1-201ENST00000490892 383 ntBASIC6.15□□□□□ -1.42
CDH4P55283 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.15□□□□□ -1.42
CDH4P55283 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.15□□□□□ -1.42
CDH4P55283 AC060775.1-201ENST00000518241 520 ntBASIC6.15□□□□□ -1.42
CDH4P55283 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CDH4P55283 WBP1LP3-201ENST00000523033 208 ntBASIC6.15□□□□□ -1.42
CDH4P55283 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH4P55283 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.15□□□□□ -1.42
CDH4P55283 MIR132-201ENST00000591554 101 ntBASIC6.15□□□□□ -1.42
CDH4P55283 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.15□□□□□ -1.42
CDH4P55283 AL365181.4-201ENST00000609800 547 ntBASIC6.15□□□□□ -1.42
CDH4P55283 FO681491.1-202ENST00000623392 737 ntBASIC6.15□□□□□ -1.42
CDH4P55283 AC022400.9-201ENST00000623633 273 ntBASIC6.15□□□□□ -1.42
CDH4P55283 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.15□□□□□ -1.42
CDH4P55283 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDH4P55283 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.15□□□□□ -1.43
CDH4P55283 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CDH4P55283 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDH4P55283 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CDH4P55283 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CDH4P55283 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CDH4P55283 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.15□□□□□ -1.43
CDH4P55283 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
CDH4P55283 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.15□□□□□ -1.43
CDH4P55283 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.15□□□□□ -1.43
CDH4P55283 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDH4P55283 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CDH4P55283 AL121768.1-201ENST00000613917 2544 ntBASIC6.15□□□□□ -1.43
CDH4P55283 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
CDH4P55283 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDH4P55283 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.15□□□□□ -1.43
CDH4P55283 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH4P55283 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH4P55283 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH4P55283 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH4P55283 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CDH4P55283 AC011504.1-201ENST00000623331 4103 ntBASIC6.14□□□□□ -1.43
CDH4P55283 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
CDH4P55283 THAP12P9-201ENST00000503971 2360 ntBASIC6.14□□□□□ -1.43
CDH4P55283 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH4P55283 SELENOWP1-201ENST00000322792 252 ntBASIC6.14□□□□□ -1.43
CDH4P55283 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH4P55283 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CDH4P55283 BX284632.2-201ENST00000421091 399 ntBASIC6.14□□□□□ -1.43
CDH4P55283 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH4P55283 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH4P55283 GAPDHP34-201ENST00000432112 823 ntBASIC6.14□□□□□ -1.43
CDH4P55283 AL445928.1-201ENST00000435545 222 ntBASIC6.14□□□□□ -1.43
CDH4P55283 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CDH4P55283 AL512605.1-202ENST00000441919 381 ntBASIC6.14□□□□□ -1.43
CDH4P55283 RPS7P3-201ENST00000443360 580 ntBASIC6.14□□□□□ -1.43
CDH4P55283 AL359955.2-201ENST00000445380 353 ntBASIC6.14□□□□□ -1.43
CDH4P55283 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH4P55283 SDC4P-201ENST00000453285 601 ntBASIC6.14□□□□□ -1.43
CDH4P55283 AC094085.1-201ENST00000468914 584 ntBASIC6.14□□□□□ -1.43
CDH4P55283 AC008629.2-201ENST00000503783 483 ntBASIC6.14□□□□□ -1.43
CDH4P55283 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH4P55283 Y_RNA.667-201ENST00000516212 107 ntBASIC6.14□□□□□ -1.43
CDH4P55283 RNA5SP438-201ENST00000516561 112 ntBASIC6.14□□□□□ -1.43
CDH4P55283 AC008429.4-201ENST00000521201 182 ntBASIC6.14□□□□□ -1.43
CDH4P55283 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH4P55283 MIR4776-2-201ENST00000580204 80 ntBASIC6.14□□□□□ -1.43
CDH4P55283 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.14□□□□□ -1.43
CDH4P55283 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH4P55283 uc_338.26-201ENST00000612659 160 ntBASIC6.14□□□□□ -1.43
CDH4P55283 AL021918.2-201ENST00000613415 194 ntBASIC6.14□□□□□ -1.43
CDH4P55283 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH4P55283 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH4P55283 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CDH4P55283 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.14□□□□□ -1.43
CDH4P55283 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH4P55283 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH4P55283 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH4P55283 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH4P55283 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CDH4P55283 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CDH4P55283 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH4P55283 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH4P55283 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH4P55283 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH4P55283 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms