Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC004836.1-201ENST00000623032 634 ntBASIC5.96□□□□□ -1.46
PDX1P52945 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
PDX1P52945 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.96□□□□□ -1.46
PDX1P52945 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDX1P52945 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PDX1P52945 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDX1P52945 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.96□□□□□ -1.46
PDX1P52945 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.96□□□□□ -1.46
PDX1P52945 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PDX1P52945 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.96□□□□□ -1.46
PDX1P52945 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.96□□□□□ -1.46
PDX1P52945 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDX1P52945 CIR1P2-201ENST00000514821 1342 ntBASIC5.96□□□□□ -1.46
PDX1P52945 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDX1P52945 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.95□□□□□ -1.46
PDX1P52945 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDX1P52945 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDX1P52945 AC119674.1-213ENST00000641177 1386 ntBASIC5.95□□□□□ -1.46
PDX1P52945 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDX1P52945 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDX1P52945 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.95□□□□□ -1.46
PDX1P52945 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.95□□□□□ -1.46
PDX1P52945 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.95□□□□□ -1.46
PDX1P52945 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDX1P52945 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.95□□□□□ -1.46
PDX1P52945 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDX1P52945 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDX1P52945 AC245096.1-201ENST00000413104 546 ntBASIC5.95□□□□□ -1.46
PDX1P52945 AL354890.1-201ENST00000413730 346 ntBASIC5.95□□□□□ -1.46
PDX1P52945 MTATP6P19-201ENST00000413797 659 ntBASIC5.95□□□□□ -1.46
PDX1P52945 AC007568.1-201ENST00000422912 471 ntBASIC5.95□□□□□ -1.46
PDX1P52945 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDX1P52945 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.95□□□□□ -1.46
PDX1P52945 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.95□□□□□ -1.46
PDX1P52945 NDUFS5P5-201ENST00000437256 321 ntBASIC5.95□□□□□ -1.46
PDX1P52945 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.95□□□□□ -1.46
PDX1P52945 ACA64.1-201ENST00000459171 127 ntBASIC5.95□□□□□ -1.46
PDX1P52945 RN7SL284P-201ENST00000498823 275 ntBASIC5.95□□□□□ -1.46
PDX1P52945 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.95□□□□□ -1.46
PDX1P52945 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.95□□□□□ -1.46
PDX1P52945 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.95□□□□□ -1.46
PDX1P52945 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDX1P52945 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDX1P52945 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.95□□□□□ -1.46
PDX1P52945 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.95□□□□□ -1.46
PDX1P52945 AC092121.1-201ENST00000569452 202 ntBASIC5.95□□□□□ -1.46
PDX1P52945 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.95□□□□□ -1.46
PDX1P52945 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.95□□□□□ -1.46
PDX1P52945 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDX1P52945 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.95□□□□□ -1.46
PDX1P52945 AC009237.12-201ENST00000604755 742 ntBASIC5.95□□□□□ -1.46
PDX1P52945 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.95□□□□□ -1.46
PDX1P52945 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.95□□□□□ -1.46
PDX1P52945 AP005431.1-201ENST00000618479 319 ntBASIC5.95□□□□□ -1.46
PDX1P52945 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.95□□□□□ -1.46
PDX1P52945 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.95□□□□□ -1.46
PDX1P52945 AL136228.1-201ENST00000622221 319 ntBASIC5.95□□□□□ -1.46
PDX1P52945 AC011369.2-201ENST00000624423 1567 ntBASIC5.95□□□□□ -1.46
PDX1P52945 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.95□□□□□ -1.46
PDX1P52945 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.95□□□□□ -1.46
PDX1P52945 AP000547.3-204ENST00000588548 2523 ntBASIC5.95□□□□□ -1.46
PDX1P52945 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PDX1P52945 AC006511.3-201ENST00000624929 1783 ntBASIC5.95□□□□□ -1.46
PDX1P52945 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDX1P52945 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.95□□□□□ -1.46
PDX1P52945 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.95□□□□□ -1.46
PDX1P52945 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDX1P52945 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.94□□□□□ -1.46
PDX1P52945 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDX1P52945 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.94□□□□□ -1.46
PDX1P52945 BIN2P1-201ENST00000504996 1530 ntBASIC5.94□□□□□ -1.46
PDX1P52945 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.94□□□□□ -1.46
PDX1P52945 AC022325.1-201ENST00000502748 2199 ntBASIC5.94□□□□□ -1.46
PDX1P52945 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDX1P52945 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDX1P52945 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.94□□□□□ -1.46
PDX1P52945 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.94□□□□□ -1.46
PDX1P52945 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDX1P52945 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.94□□□□□ -1.46
PDX1P52945 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
PDX1P52945 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDX1P52945 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PDX1P52945 RNA5SP178-201ENST00000410380 128 ntBASIC5.94□□□□□ -1.46
PDX1P52945 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.94□□□□□ -1.46
PDX1P52945 PCBP2P1-201ENST00000437262 977 ntBASIC5.94□□□□□ -1.46
PDX1P52945 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.94□□□□□ -1.46
PDX1P52945 FTLP8-201ENST00000446770 267 ntBASIC5.94□□□□□ -1.46
PDX1P52945 MORF4-201ENST00000447135 971 ntBASIC5.94□□□□□ -1.46
PDX1P52945 AC005077.1-201ENST00000449226 375 ntBASIC5.94□□□□□ -1.46
PDX1P52945 OR7L1P-201ENST00000456181 380 ntBASIC5.94□□□□□ -1.46
PDX1P52945 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.94□□□□□ -1.46
PDX1P52945 RN7SL177P-201ENST00000476596 299 ntBASIC5.94□□□□□ -1.46
PDX1P52945 RPL17P2-201ENST00000491913 451 ntBASIC5.94□□□□□ -1.46
PDX1P52945 Y_RNA.710-201ENST00000516975 110 ntBASIC5.94□□□□□ -1.46
PDX1P52945 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.94□□□□□ -1.46
PDX1P52945 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.94□□□□□ -1.46
PDX1P52945 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDX1P52945 AC135626.1-201ENST00000556983 435 ntBASIC5.94□□□□□ -1.46
PDX1P52945 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.94□□□□□ -1.46
PDX1P52945 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms