Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
USP11P51784 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC7.71□□□□□ -1.18
USP11P51784 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 RN7SKP118-201ENST00000364331 330 ntBASIC7.71□□□□□ -1.18
USP11P51784 MIR421-201ENST00000365696 85 ntBASIC7.71□□□□□ -1.18
USP11P51784 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC7.71□□□□□ -1.18
USP11P51784 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 CGA-201ENST00000369582 729 ntTSL 5 BASIC7.71□□□□□ -1.18
USP11P51784 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 AC026310.1-201ENST00000396004 378 ntBASIC7.71□□□□□ -1.18
USP11P51784 AC009500.1-201ENST00000420684 583 ntBASIC7.71□□□□□ -1.18
USP11P51784 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.71□□□□□ -1.18
USP11P51784 NPM1P25-201ENST00000429734 854 ntBASIC7.71□□□□□ -1.18
USP11P51784 AL590128.1-201ENST00000433407 286 ntBASIC7.71□□□□□ -1.18
USP11P51784 AC084290.1-201ENST00000434995 374 ntBASIC7.71□□□□□ -1.18
USP11P51784 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.71□□□□□ -1.18
USP11P51784 GAPDHP20-201ENST00000444107 1007 ntBASIC7.71□□□□□ -1.18
USP11P51784 AL121578.2-201ENST00000448797 447 ntBASIC7.71□□□□□ -1.18
USP11P51784 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.71□□□□□ -1.18
USP11P51784 RPL12P26-201ENST00000452430 487 ntBASIC7.71□□□□□ -1.18
USP11P51784 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.71□□□□□ -1.18
USP11P51784 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC7.71□□□□□ -1.18
USP11P51784 NDUFA5P5-201ENST00000468361 342 ntBASIC7.71□□□□□ -1.18
USP11P51784 MTND2P14-201ENST00000482139 351 ntBASIC7.71□□□□□ -1.18
USP11P51784 RPL23AP80-201ENST00000495605 424 ntBASIC7.71□□□□□ -1.18
USP11P51784 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.71□□□□□ -1.18
USP11P51784 GOLGA5P1-201ENST00000507317 980 ntBASIC7.71□□□□□ -1.18
USP11P51784 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 AC074087.1-201ENST00000512059 724 ntBASIC7.71□□□□□ -1.18
USP11P51784 IGKV2D-38-201ENST00000518423 240 ntBASIC7.71□□□□□ -1.18
USP11P51784 RPL12P22-201ENST00000519073 490 ntBASIC7.71□□□□□ -1.18
USP11P51784 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC7.71□□□□□ -1.18
USP11P51784 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC7.71□□□□□ -1.18
USP11P51784 CYB5AP5-201ENST00000549779 389 ntBASIC7.71□□□□□ -1.18
USP11P51784 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC7.71□□□□□ -1.18
USP11P51784 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.71□□□□□ -1.18
USP11P51784 AC135628.1-201ENST00000568867 534 ntBASIC7.71□□□□□ -1.18
USP11P51784 AC068135.2-201ENST00000569293 1028 ntBASIC7.71□□□□□ -1.18
USP11P51784 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC7.71□□□□□ -1.18
USP11P51784 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.71□□□□□ -1.18
USP11P51784 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC7.71□□□□□ -1.18
USP11P51784 AC010245.2-201ENST00000606908 1167 ntBASIC7.71□□□□□ -1.18
USP11P51784 AL031775.1-201ENST00000607014 887 ntBASIC7.71□□□□□ -1.18
USP11P51784 AC087241.4-201ENST00000612441 480 ntBASIC7.71□□□□□ -1.18
USP11P51784 AL445649.1-201ENST00000615941 691 ntBASIC7.71□□□□□ -1.18
USP11P51784 AC006328.2-201ENST00000623198 397 ntBASIC7.71□□□□□ -1.18
USP11P51784 AC067852.7-201ENST00000623270 535 ntBASIC7.71□□□□□ -1.18
USP11P51784 AC012005.2-201ENST00000624333 397 ntBASIC7.71□□□□□ -1.18
USP11P51784 AP003072.4-201ENST00000624580 310 ntBASIC7.71□□□□□ -1.18
USP11P51784 AC018659.2-201ENST00000624690 715 ntBASIC7.71□□□□□ -1.18
USP11P51784 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
USP11P51784 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC7.71□□□□□ -1.18
USP11P51784 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC7.71□□□□□ -1.18
USP11P51784 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.71□□□□□ -1.18
USP11P51784 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.71□□□□□ -1.18
USP11P51784 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
USP11P51784 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 AC107980.1-201ENST00000558671 3355 ntBASIC7.71□□□□□ -1.18
USP11P51784 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USP11P51784 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
USP11P51784 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.7□□□□□ -1.18
USP11P51784 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USP11P51784 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.7□□□□□ -1.18
USP11P51784 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.7□□□□□ -1.18
USP11P51784 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.7□□□□□ -1.18
USP11P51784 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.7□□□□□ -1.18
USP11P51784 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.7□□□□□ -1.18
USP11P51784 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USP11P51784 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USP11P51784 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
USP11P51784 Y_RNA.62-201ENST00000362840 99 ntBASIC7.7□□□□□ -1.18
USP11P51784 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.7□□□□□ -1.18
USP11P51784 RNU6-207P-201ENST00000384137 107 ntBASIC7.7□□□□□ -1.18
USP11P51784 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
USP11P51784 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC7.7□□□□□ -1.18
USP11P51784 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USP11P51784 HSPD1P16-201ENST00000402302 394 ntBASIC7.7□□□□□ -1.18
USP11P51784 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC7.7□□□□□ -1.18
USP11P51784 MTCO3P41-201ENST00000414801 328 ntBASIC7.7□□□□□ -1.18
USP11P51784 SPATA20P1-201ENST00000423089 438 ntBASIC7.7□□□□□ -1.18
USP11P51784 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
USP11P51784 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.7□□□□□ -1.18
USP11P51784 AC239367.3-201ENST00000428996 814 ntBASIC7.7□□□□□ -1.18
USP11P51784 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.7□□□□□ -1.18
USP11P51784 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.7□□□□□ -1.18
USP11P51784 AL392003.1-201ENST00000434394 243 ntBASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms