Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SLC25A51P1-201ENST00000468432 871 ntBASIC6.3□□□□□ -1.4
HADHAP40939 RPL12P31-201ENST00000478433 450 ntBASIC6.3□□□□□ -1.4
HADHAP40939 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.3□□□□□ -1.4
HADHAP40939 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC6.3□□□□□ -1.4
HADHAP40939 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.3□□□□□ -1.4
HADHAP40939 OR6M2P-201ENST00000529831 871 ntBASIC6.3□□□□□ -1.4
HADHAP40939 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.3□□□□□ -1.4
HADHAP40939 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.3□□□□□ -1.4
HADHAP40939 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.3□□□□□ -1.4
HADHAP40939 AC083837.1-201ENST00000565297 2994 ntBASIC6.3□□□□□ -1.4
HADHAP40939 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HADHAP40939 AC004232.2-201ENST00000574245 821 ntBASIC6.3□□□□□ -1.4
HADHAP40939 MIR4271-201ENST00000582451 67 ntBASIC6.3□□□□□ -1.4
HADHAP40939 RN7SL475P-201ENST00000583379 298 ntBASIC6.3□□□□□ -1.4
HADHAP40939 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HADHAP40939 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.3□□□□□ -1.4
HADHAP40939 AC063977.7-201ENST00000594454 337 ntBASIC6.3□□□□□ -1.4
HADHAP40939 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.3□□□□□ -1.4
HADHAP40939 OR7M1P-201ENST00000608946 533 ntBASIC6.3□□□□□ -1.4
HADHAP40939 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.3□□□□□ -1.4
HADHAP40939 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.3□□□□□ -1.4
HADHAP40939 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HADHAP40939 AL591926.1-201ENST00000620542 217 ntBASIC6.3□□□□□ -1.4
HADHAP40939 CAP1P2-201ENST00000417455 1409 ntBASIC6.3□□□□□ -1.4
HADHAP40939 AC092111.2-201ENST00000611627 1414 ntBASIC6.3□□□□□ -1.4
HADHAP40939 AC096921.2-201ENST00000561507 1916 ntBASIC6.3□□□□□ -1.4
HADHAP40939 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HADHAP40939 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.3□□□□□ -1.4
HADHAP40939 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
HADHAP40939 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.3□□□□□ -1.4
HADHAP40939 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.3□□□□□ -1.4
HADHAP40939 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.3□□□□□ -1.4
HADHAP40939 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.3□□□□□ -1.4
HADHAP40939 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.29□□□□□ -1.4
HADHAP40939 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.29□□□□□ -1.4
HADHAP40939 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.29□□□□□ -1.4
HADHAP40939 CASC19-246ENST00000641625 1606 ntBASIC6.29□□□□□ -1.4
HADHAP40939 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HADHAP40939 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HADHAP40939 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
HADHAP40939 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HADHAP40939 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HADHAP40939 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HADHAP40939 PSMA6P1-201ENST00000400275 741 ntBASIC6.29□□□□□ -1.4
HADHAP40939 AL139039.2-201ENST00000407436 479 ntBASIC6.29□□□□□ -1.4
HADHAP40939 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.29□□□□□ -1.4
HADHAP40939 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.29□□□□□ -1.4
HADHAP40939 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HADHAP40939 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.29□□□□□ -1.4
HADHAP40939 OSTCP4-201ENST00000424397 449 ntBASIC6.29□□□□□ -1.4
HADHAP40939 SOCS5P1-201ENST00000440415 949 ntBASIC6.29□□□□□ -1.4
HADHAP40939 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.29□□□□□ -1.4
HADHAP40939 RANP2-201ENST00000456833 229 ntBASIC6.29□□□□□ -1.4
HADHAP40939 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HADHAP40939 AC122718.2-201ENST00000505325 591 ntBASIC6.29□□□□□ -1.4
HADHAP40939 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.29□□□□□ -1.4
HADHAP40939 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.29□□□□□ -1.4
HADHAP40939 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.29□□□□□ -1.4
HADHAP40939 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.29□□□□□ -1.4
HADHAP40939 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.29□□□□□ -1.4
HADHAP40939 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.29□□□□□ -1.4
HADHAP40939 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.29□□□□□ -1.4
HADHAP40939 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.29□□□□□ -1.4
HADHAP40939 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.29□□□□□ -1.4
HADHAP40939 LINC01613-201ENST00000561476 2780 ntBASIC6.29□□□□□ -1.4
HADHAP40939 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.29□□□□□ -1.4
HADHAP40939 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.29□□□□□ -1.4
HADHAP40939 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.29□□□□□ -1.4
HADHAP40939 AL138960.1-201ENST00000613838 513 ntBASIC6.29□□□□□ -1.4
HADHAP40939 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.29□□□□□ -1.4
HADHAP40939 AC003992.1-201ENST00000635364 557 ntBASIC6.29□□□□□ -1.4
HADHAP40939 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HADHAP40939 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HADHAP40939 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HADHAP40939 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
HADHAP40939 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
HADHAP40939 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HADHAP40939 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HADHAP40939 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HADHAP40939 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
HADHAP40939 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.28□□□□□ -1.4
HADHAP40939 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HADHAP40939 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HADHAP40939 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HADHAP40939 RNU6-697P-201ENST00000363348 107 ntBASIC6.28□□□□□ -1.4
HADHAP40939 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HADHAP40939 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.28□□□□□ -1.4
HADHAP40939 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HADHAP40939 GAPDHP34-201ENST00000432112 823 ntBASIC6.28□□□□□ -1.4
HADHAP40939 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.28□□□□□ -1.4
HADHAP40939 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HADHAP40939 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.28□□□□□ -1.4
HADHAP40939 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.28□□□□□ -1.4
HADHAP40939 CTSLP6-201ENST00000458273 1002 ntBASIC6.28□□□□□ -1.4
HADHAP40939 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.28□□□□□ -1.4
HADHAP40939 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.28□□□□□ -1.4
HADHAP40939 AC093827.1-201ENST00000480094 861 ntBASIC6.28□□□□□ -1.4
HADHAP40939 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.28□□□□□ -1.4
HADHAP40939 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.28□□□□□ -1.4
HADHAP40939 AL035690.1-201ENST00000490892 383 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms