Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC4.27□□□□□ -1.73
CKS2P33552 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC4.27□□□□□ -1.73
CKS2P33552 AC092944.2-201ENST00000605443 889 ntBASIC4.27□□□□□ -1.73
CKS2P33552 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.27□□□□□ -1.73
CKS2P33552 AL137000.1-201ENST00000610528 1244 ntBASIC4.27□□□□□ -1.73
CKS2P33552 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CKS2P33552 AC138965.3-201ENST00000623875 498 ntBASIC4.27□□□□□ -1.73
CKS2P33552 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.27□□□□□ -1.73
CKS2P33552 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC4.27□□□□□ -1.73
CKS2P33552 TEX41-271ENST00000628213 993 ntTSL 5 BASIC4.27□□□□□ -1.73
CKS2P33552 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.27□□□□□ -1.73
CKS2P33552 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 AP004607.3-201ENST00000530354 3915 ntBASIC4.27□□□□□ -1.73
CKS2P33552 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.27□□□□□ -1.73
CKS2P33552 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.27□□□□□ -1.73
CKS2P33552 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CKS2P33552 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CKS2P33552 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 RBMY1HP-201ENST00000382759 1389 ntBASIC4.27□□□□□ -1.73
CKS2P33552 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS2P33552 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CKS2P33552 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CKS2P33552 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC4.26□□□□□ -1.73
CKS2P33552 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CKS2P33552 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.26□□□□□ -1.73
CKS2P33552 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.26□□□□□ -1.73
CKS2P33552 AL133243.2-201ENST00000610331 1621 ntBASIC4.26□□□□□ -1.73
CKS2P33552 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CKS2P33552 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CKS2P33552 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.26□□□□□ -1.73
CKS2P33552 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CKS2P33552 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CKS2P33552 RNA5SP346-201ENST00000363541 121 ntBASIC4.26□□□□□ -1.73
CKS2P33552 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.26□□□□□ -1.73
CKS2P33552 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS2P33552 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CKS2P33552 RNU1-136P-201ENST00000384181 164 ntBASIC4.26□□□□□ -1.73
CKS2P33552 RNA5SP91-201ENST00000390902 119 ntBASIC4.26□□□□□ -1.73
CKS2P33552 RPL12P10-201ENST00000413498 498 ntBASIC4.26□□□□□ -1.73
CKS2P33552 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS2P33552 OR52S1P-201ENST00000427016 937 ntBASIC4.26□□□□□ -1.73
CKS2P33552 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS2P33552 GTF3AP6-201ENST00000432585 986 ntBASIC4.26□□□□□ -1.73
CKS2P33552 AC112492.2-201ENST00000432774 1030 ntBASIC4.26□□□□□ -1.73
CKS2P33552 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS2P33552 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS2P33552 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.26□□□□□ -1.73
CKS2P33552 HIGD1AP16-201ENST00000450986 258 ntBASIC4.26□□□□□ -1.73
CKS2P33552 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS2P33552 AC104164.1-201ENST00000460282 590 ntBASIC4.26□□□□□ -1.73
CKS2P33552 RN7SL413P-201ENST00000482700 297 ntBASIC4.26□□□□□ -1.73
CKS2P33552 RPL38P3-201ENST00000484463 213 ntBASIC4.26□□□□□ -1.73
CKS2P33552 AF305872.1-201ENST00000485217 471 ntBASIC4.26□□□□□ -1.73
CKS2P33552 RPL10P7-201ENST00000495649 625 ntBASIC4.26□□□□□ -1.73
CKS2P33552 MORF4L2P1-201ENST00000503761 858 ntBASIC4.26□□□□□ -1.73
CKS2P33552 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.26□□□□□ -1.73
CKS2P33552 RN7SKP242-201ENST00000515967 289 ntBASIC4.26□□□□□ -1.73
CKS2P33552 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.26□□□□□ -1.73
CKS2P33552 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS2P33552 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS2P33552 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS2P33552 AC008055.1-201ENST00000547032 609 ntBASIC4.26□□□□□ -1.73
CKS2P33552 NF1P12-201ENST00000549593 583 ntBASIC4.26□□□□□ -1.73
CKS2P33552 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.26□□□□□ -1.73
CKS2P33552 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC4.26□□□□□ -1.73
CKS2P33552 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.26□□□□□ -1.73
CKS2P33552 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS2P33552 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.26□□□□□ -1.73
CKS2P33552 RN7SL131P-201ENST00000579043 256 ntBASIC4.26□□□□□ -1.73
CKS2P33552 RPL29P33-201ENST00000587474 316 ntBASIC4.26□□□□□ -1.73
CKS2P33552 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC4.26□□□□□ -1.73
CKS2P33552 AL162574.1-201ENST00000615702 950 ntBASIC4.26□□□□□ -1.73
CKS2P33552 AC073488.6-201ENST00000632293 754 ntBASIC4.26□□□□□ -1.73
CKS2P33552 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.26□□□□□ -1.73
CKS2P33552 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CKS2P33552 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.26□□□□□ -1.73
CKS2P33552 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CKS2P33552 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CKS2P33552 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CKS2P33552 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CKS2P33552 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
CKS2P33552 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CKS2P33552 TCP11X1-202ENST00000622971 1372 ntBASIC4.26□□□□□ -1.73
CKS2P33552 AC005261.6-201ENST00000623072 1387 ntBASIC4.26□□□□□ -1.73
CKS2P33552 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
CKS2P33552 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
CKS2P33552 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.25□□□□□ -1.73
CKS2P33552 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CKS2P33552 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CKS2P33552 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.25□□□□□ -1.73
CKS2P33552 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CKS2P33552 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC4.25□□□□□ -1.73
CKS2P33552 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CKS2P33552 RN7SKP1-201ENST00000365525 307 ntBASIC4.25□□□□□ -1.73
CKS2P33552 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms