Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC8.57□□□□□ -1.04
PTPRMP28827 RPL32P33-201ENST00000487023 394 ntBASIC8.57□□□□□ -1.04
PTPRMP28827 SLC25A14P1-201ENST00000502867 901 ntBASIC8.57□□□□□ -1.04
PTPRMP28827 IGBP1P5-201ENST00000507524 1000 ntBASIC8.57□□□□□ -1.04
PTPRMP28827 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC8.57□□□□□ -1.04
PTPRMP28827 PCNPP1-201ENST00000552501 511 ntBASIC8.57□□□□□ -1.04
PTPRMP28827 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC8.57□□□□□ -1.04
PTPRMP28827 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC8.57□□□□□ -1.04
PTPRMP28827 AC068790.4-201ENST00000602474 263 ntBASIC8.57□□□□□ -1.04
PTPRMP28827 AC013731.1-201ENST00000604340 883 ntBASIC8.57□□□□□ -1.04
PTPRMP28827 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC8.57□□□□□ -1.04
PTPRMP28827 UGT2B27P-201ENST00000505092 1620 ntBASIC8.57□□□□□ -1.04
PTPRMP28827 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PTPRMP28827 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.56□□□□□ -1.04
PTPRMP28827 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.56□□□□□ -1.04
PTPRMP28827 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC8.56□□□□□ -1.04
PTPRMP28827 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
PTPRMP28827 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC8.56□□□□□ -1.04
PTPRMP28827 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PTPRMP28827 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8.56□□□□□ -1.04
PTPRMP28827 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
PTPRMP28827 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PTPRMP28827 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC8.56□□□□□ -1.04
PTPRMP28827 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.56□□□□□ -1.04
PTPRMP28827 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC8.56□□□□□ -1.04
PTPRMP28827 RNU4-4P-201ENST00000364588 130 ntBASIC8.56□□□□□ -1.04
PTPRMP28827 AC068538.1-201ENST00000376856 336 ntBASIC8.56□□□□□ -1.04
PTPRMP28827 RPS4XP5-201ENST00000419038 768 ntBASIC8.56□□□□□ -1.04
PTPRMP28827 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC8.56□□□□□ -1.04
PTPRMP28827 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC8.56□□□□□ -1.04
PTPRMP28827 UBE2Q2P10-201ENST00000514854 900 ntBASIC8.56□□□□□ -1.04
PTPRMP28827 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC8.56□□□□□ -1.04
PTPRMP28827 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC8.56□□□□□ -1.04
PTPRMP28827 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PTPRMP28827 OR6M2P-201ENST00000529831 871 ntBASIC8.56□□□□□ -1.04
PTPRMP28827 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC8.56□□□□□ -1.04
PTPRMP28827 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.56□□□□□ -1.04
PTPRMP28827 AL110118.1-201ENST00000553543 400 ntBASIC8.56□□□□□ -1.04
PTPRMP28827 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PTPRMP28827 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC8.56□□□□□ -1.04
PTPRMP28827 GTF2IP4-201ENST00000453092 2054 ntBASIC8.56□□□□□ -1.04
PTPRMP28827 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
PTPRMP28827 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC8.56□□□□□ -1.04
PTPRMP28827 ERG-202ENST00000398897 4651 ntTSL 5 BASIC8.56□□□□□ -1.04
PTPRMP28827 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PTPRMP28827 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PTPRMP28827 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
PTPRMP28827 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PTPRMP28827 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
PTPRMP28827 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
PTPRMP28827 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
PTPRMP28827 AC011815.2-201ENST00000618230 2021 ntBASIC8.55□□□□□ -1.04
PTPRMP28827 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC8.55□□□□□ -1.04
PTPRMP28827 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
PTPRMP28827 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PTPRMP28827 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PTPRMP28827 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
PTPRMP28827 AL590004.4-201ENST00000566733 7060 ntBASIC8.55□□□□□ -1.04
PTPRMP28827 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PTPRMP28827 RN7SKP28-201ENST00000364770 305 ntBASIC8.55□□□□□ -1.04
PTPRMP28827 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PTPRMP28827 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PTPRMP28827 RPS4XP9-201ENST00000405151 780 ntBASIC8.55□□□□□ -1.04
PTPRMP28827 U3.36-201ENST00000408418 213 ntBASIC8.55□□□□□ -1.04
PTPRMP28827 OR5W1P-201ENST00000423705 938 ntBASIC8.55□□□□□ -1.04
PTPRMP28827 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC8.55□□□□□ -1.04
PTPRMP28827 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC8.55□□□□□ -1.04
PTPRMP28827 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PTPRMP28827 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC8.55□□□□□ -1.04
PTPRMP28827 TXNP4-201ENST00000575018 310 ntBASIC8.55□□□□□ -1.04
PTPRMP28827 MIR5095-201ENST00000578844 88 ntBASIC8.55□□□□□ -1.04
PTPRMP28827 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC8.55□□□□□ -1.04
PTPRMP28827 AL392048.1-201ENST00000613946 534 ntBASIC8.55□□□□□ -1.04
PTPRMP28827 MIR6758-201ENST00000620653 63 ntBASIC8.55□□□□□ -1.04
PTPRMP28827 AC132068.1-201ENST00000623805 459 ntBASIC8.55□□□□□ -1.04
PTPRMP28827 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC8.55□□□□□ -1.04
PTPRMP28827 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
PTPRMP28827 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PTPRMP28827 AP002364.1-201ENST00000623330 3386 ntBASIC8.55□□□□□ -1.04
PTPRMP28827 MALAT1-202ENST00000534336 8708 ntBASIC8.55□□□□□ -1.04
PTPRMP28827 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PTPRMP28827 AP001541.1-201ENST00000623322 1904 ntBASIC8.54□□□□□ -1.04
PTPRMP28827 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PTPRMP28827 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
PTPRMP28827 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
PTPRMP28827 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
PTPRMP28827 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC8.54□□□□□ -1.04
PTPRMP28827 USP9YP9-201ENST00000429406 715 ntBASIC8.54□□□□□ -1.04
PTPRMP28827 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC8.54□□□□□ -1.04
PTPRMP28827 AC087672.1-201ENST00000479876 766 ntBASIC8.54□□□□□ -1.04
PTPRMP28827 AL161747.1-201ENST00000480068 358 ntBASIC8.54□□□□□ -1.04
PTPRMP28827 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PTPRMP28827 HPRT1P1-201ENST00000509498 657 ntBASIC8.54□□□□□ -1.04
PTPRMP28827 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC8.54□□□□□ -1.04
PTPRMP28827 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC8.54□□□□□ -1.04
PTPRMP28827 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PTPRMP28827 MRPS21P7-201ENST00000566937 238 ntBASIC8.54□□□□□ -1.04
PTPRMP28827 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC8.54□□□□□ -1.04
PTPRMP28827 MIR7703-201ENST00000620784 77 ntBASIC8.54□□□□□ -1.04
PTPRMP28827 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms