Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
ERCC3P19447 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC8.02□□□□□ -1.13
ERCC3P19447 AC073052.1-201ENST00000440417 714 ntBASIC8.02□□□□□ -1.13
ERCC3P19447 OR51B8P-201ENST00000449892 769 ntBASIC8.02□□□□□ -1.13
ERCC3P19447 AL122001.1-201ENST00000457027 370 ntBASIC8.02□□□□□ -1.13
ERCC3P19447 AC005410.1-202ENST00000460347 485 ntBASIC8.02□□□□□ -1.13
ERCC3P19447 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC8.02□□□□□ -1.13
ERCC3P19447 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC8.02□□□□□ -1.13
ERCC3P19447 IGHV3-63-201ENST00000518422 341 ntBASIC8.02□□□□□ -1.13
ERCC3P19447 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC8.02□□□□□ -1.13
ERCC3P19447 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.02□□□□□ -1.13
ERCC3P19447 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC8.02□□□□□ -1.13
ERCC3P19447 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC8.02□□□□□ -1.13
ERCC3P19447 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC8.02□□□□□ -1.13
ERCC3P19447 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC8.02□□□□□ -1.13
ERCC3P19447 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC8.02□□□□□ -1.13
ERCC3P19447 RPL7AP69-201ENST00000595306 806 ntBASIC8.02□□□□□ -1.13
ERCC3P19447 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 RPS11-205ENST00000599561 430 ntTSL 5 BASIC8.02□□□□□ -1.13
ERCC3P19447 AC024060.1-201ENST00000607052 494 ntBASIC8.02□□□□□ -1.13
ERCC3P19447 AL359091.2-201ENST00000609303 556 ntBASIC8.02□□□□□ -1.13
ERCC3P19447 5S_rRNA.23-201ENST00000612086 102 ntBASIC8.02□□□□□ -1.13
ERCC3P19447 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 SNORA11.6-201ENST00000619030 128 ntBASIC8.02□□□□□ -1.13
ERCC3P19447 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC8.02□□□□□ -1.13
ERCC3P19447 KARSP2-201ENST00000415696 1639 ntBASIC8.02□□□□□ -1.13
ERCC3P19447 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC8.02□□□□□ -1.13
ERCC3P19447 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
ERCC3P19447 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC8.02□□□□□ -1.13
ERCC3P19447 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.02□□□□□ -1.13
ERCC3P19447 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC8.02□□□□□ -1.13
ERCC3P19447 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC8.02□□□□□ -1.13
ERCC3P19447 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ERCC3P19447 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC8.02□□□□□ -1.13
ERCC3P19447 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ERCC3P19447 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.01□□□□□ -1.13
ERCC3P19447 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
ERCC3P19447 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
ERCC3P19447 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
ERCC3P19447 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
ERCC3P19447 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
ERCC3P19447 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.01□□□□□ -1.13
ERCC3P19447 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
ERCC3P19447 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
ERCC3P19447 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
ERCC3P19447 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC8.01□□□□□ -1.13
ERCC3P19447 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC8.01□□□□□ -1.13
ERCC3P19447 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
ERCC3P19447 PPBPP2-201ENST00000513150 1362 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC8.01□□□□□ -1.13
ERCC3P19447 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ERCC3P19447 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.01□□□□□ -1.13
ERCC3P19447 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.01□□□□□ -1.13
ERCC3P19447 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.01□□□□□ -1.13
ERCC3P19447 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
ERCC3P19447 AC010894.1-201ENST00000313760 361 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 RN7SKP171-201ENST00000364417 303 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC8.01□□□□□ -1.13
ERCC3P19447 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
ERCC3P19447 RN7SKP278-201ENST00000410504 342 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ERCC3P19447 OR6R1P-201ENST00000431838 940 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ERCC3P19447 PTGES3P1-201ENST00000439531 483 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 EEF1A1P39-201ENST00000440791 250 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 AC093166.3-201ENST00000448785 303 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 Z99714.1-201ENST00000450463 807 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ERCC3P19447 RPL29P23-201ENST00000486188 442 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 AC066616.1-201ENST00000486795 413 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 RN7SL37P-201ENST00000490461 307 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC8.01□□□□□ -1.13
ERCC3P19447 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC8.01□□□□□ -1.13
ERCC3P19447 AC120036.3-201ENST00000517826 292 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC8.01□□□□□ -1.13
ERCC3P19447 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC8.01□□□□□ -1.13
ERCC3P19447 OR8I1P-201ENST00000529291 931 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 EMP1-206ENST00000537612 505 ntTSL 3 BASIC8.01□□□□□ -1.13
ERCC3P19447 AC006518.2-201ENST00000542513 940 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 OSBPL9P5-201ENST00000542581 171 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC8.01□□□□□ -1.13
ERCC3P19447 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC8.01□□□□□ -1.13
ERCC3P19447 AC013283.1-201ENST00000557282 492 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 AC007346.2-201ENST00000564816 892 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC8.01□□□□□ -1.13
ERCC3P19447 AC061975.8-201ENST00000587058 721 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 AC015802.2-201ENST00000589690 189 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC8.01□□□□□ -1.13
ERCC3P19447 AC013444.2-201ENST00000603317 787 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 AL139344.1-201ENST00000605228 195 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 AL645933.2-201ENST00000606743 1207 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC8.01□□□□□ -1.13
ERCC3P19447 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC8.01□□□□□ -1.13
ERCC3P19447 OR8G7P-201ENST00000616658 848 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 AC026422.1-201ENST00000623961 452 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms