Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGA1P17096 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGA1P17096 AC104695.2-201ENST00000605056 775 ntBASIC6.11□□□□□ -1.43
HMGA1P17096 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HMGA1P17096 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HMGA1P17096 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HMGA1P17096 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGA1P17096 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGA1P17096 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
HMGA1P17096 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMGA1P17096 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGA1P17096 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
HMGA1P17096 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGA1P17096 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGA1P17096 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
HMGA1P17096 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HMGA1P17096 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGA1P17096 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HMGA1P17096 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.1□□□□□ -1.43
HMGA1P17096 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HMGA1P17096 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HMGA1P17096 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
HMGA1P17096 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HMGA1P17096 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.1□□□□□ -1.43
HMGA1P17096 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HMGA1P17096 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.1□□□□□ -1.43
HMGA1P17096 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HMGA1P17096 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGA1P17096 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HMGA1P17096 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGA1P17096 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.1□□□□□ -1.43
HMGA1P17096 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGA1P17096 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.1□□□□□ -1.43
HMGA1P17096 CIR1P2-201ENST00000514821 1342 ntBASIC6.1□□□□□ -1.43
HMGA1P17096 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HMGA1P17096 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.1□□□□□ -1.43
HMGA1P17096 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGA1P17096 AL357752.1-201ENST00000412817 349 ntBASIC6.1□□□□□ -1.43
HMGA1P17096 AL596448.1-201ENST00000415024 392 ntBASIC6.1□□□□□ -1.43
HMGA1P17096 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.1□□□□□ -1.43
HMGA1P17096 AL022331.1-201ENST00000429025 477 ntBASIC6.1□□□□□ -1.43
HMGA1P17096 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.1□□□□□ -1.43
HMGA1P17096 AC073909.1-201ENST00000447112 999 ntBASIC6.1□□□□□ -1.43
HMGA1P17096 FRG2FP-204ENST00000453982 852 ntBASIC6.1□□□□□ -1.43
HMGA1P17096 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.1□□□□□ -1.43
HMGA1P17096 AC022215.1-201ENST00000481770 362 ntBASIC6.1□□□□□ -1.43
HMGA1P17096 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.1□□□□□ -1.43
HMGA1P17096 RPL7L1P4-201ENST00000513004 707 ntBASIC6.1□□□□□ -1.43
HMGA1P17096 RN7SKP288-201ENST00000516227 268 ntBASIC6.1□□□□□ -1.43
HMGA1P17096 MIR2117-201ENST00000516780 80 ntBASIC6.1□□□□□ -1.43
HMGA1P17096 SCARNA6.1-201ENST00000516989 238 ntBASIC6.1□□□□□ -1.43
HMGA1P17096 AC008429.4-201ENST00000521201 182 ntBASIC6.1□□□□□ -1.43
HMGA1P17096 HMGB1P42-201ENST00000532126 553 ntBASIC6.1□□□□□ -1.43
HMGA1P17096 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.1□□□□□ -1.43
HMGA1P17096 AC244502.2-201ENST00000543361 851 ntBASIC6.1□□□□□ -1.43
HMGA1P17096 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGA1P17096 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HMGA1P17096 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.1□□□□□ -1.43
HMGA1P17096 FO393422.1-201ENST00000603908 708 ntBASIC6.1□□□□□ -1.43
HMGA1P17096 AL589674.2-201ENST00000604304 337 ntBASIC6.1□□□□□ -1.43
HMGA1P17096 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGA1P17096 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGA1P17096 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGA1P17096 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGA1P17096 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGA1P17096 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGA1P17096 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.1□□□□□ -1.43
HMGA1P17096 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.1□□□□□ -1.43
HMGA1P17096 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HMGA1P17096 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGA1P17096 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HMGA1P17096 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGA1P17096 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HMGA1P17096 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.09□□□□□ -1.43
HMGA1P17096 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMGA1P17096 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
HMGA1P17096 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.09□□□□□ -1.43
HMGA1P17096 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGA1P17096 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMGA1P17096 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGA1P17096 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMGA1P17096 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGA1P17096 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGA1P17096 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HMGA1P17096 MIR143-201ENST00000385300 106 ntBASIC6.09□□□□□ -1.43
HMGA1P17096 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
HMGA1P17096 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.09□□□□□ -1.43
HMGA1P17096 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.09□□□□□ -1.43
HMGA1P17096 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.09□□□□□ -1.43
HMGA1P17096 NME1P1-201ENST00000420914 382 ntBASIC6.09□□□□□ -1.43
HMGA1P17096 Z84478.1-201ENST00000438230 1219 ntBASIC6.09□□□□□ -1.43
HMGA1P17096 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.09□□□□□ -1.43
HMGA1P17096 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.09□□□□□ -1.43
HMGA1P17096 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.09□□□□□ -1.43
HMGA1P17096 RPS26P39-201ENST00000469206 341 ntBASIC6.09□□□□□ -1.43
HMGA1P17096 RNU6-615P-201ENST00000516065 106 ntBASIC6.09□□□□□ -1.43
HMGA1P17096 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.09□□□□□ -1.43
HMGA1P17096 AC139365.2-201ENST00000517972 253 ntBASIC6.09□□□□□ -1.43
HMGA1P17096 MRPS16P1-201ENST00000523462 412 ntBASIC6.09□□□□□ -1.43
HMGA1P17096 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms