Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFRAP16234 AC008429.4-201ENST00000521201 182 ntBASIC6.36□□□□□ -1.39
PDGFRAP16234 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.36□□□□□ -1.39
PDGFRAP16234 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFRAP16234 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFRAP16234 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFRAP16234 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.36□□□□□ -1.39
PDGFRAP16234 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFRAP16234 AC096861.1-201ENST00000616652 240 ntBASIC6.36□□□□□ -1.39
PDGFRAP16234 AL512652.1-201ENST00000619006 500 ntBASIC6.36□□□□□ -1.39
PDGFRAP16234 AC025262.3-201ENST00000623666 360 ntBASIC6.36□□□□□ -1.39
PDGFRAP16234 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFRAP16234 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFRAP16234 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFRAP16234 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
PDGFRAP16234 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFRAP16234 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.36□□□□□ -1.39
PDGFRAP16234 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFRAP16234 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFRAP16234 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.36□□□□□ -1.39
PDGFRAP16234 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
PDGFRAP16234 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFRAP16234 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.35□□□□□ -1.39
PDGFRAP16234 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.35□□□□□ -1.39
PDGFRAP16234 AP000547.3-204ENST00000588548 2523 ntBASIC6.35□□□□□ -1.39
PDGFRAP16234 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFRAP16234 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
PDGFRAP16234 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.35□□□□□ -1.39
PDGFRAP16234 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFRAP16234 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PDGFRAP16234 SNORA77.2-201ENST00000408571 112 ntBASIC6.35□□□□□ -1.39
PDGFRAP16234 RPL12P12-201ENST00000424633 501 ntBASIC6.35□□□□□ -1.39
PDGFRAP16234 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.35□□□□□ -1.39
PDGFRAP16234 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
PDGFRAP16234 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.35□□□□□ -1.39
PDGFRAP16234 AC009963.3-201ENST00000458090 486 ntBASIC6.35□□□□□ -1.39
PDGFRAP16234 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFRAP16234 SEPT14P1-201ENST00000458703 648 ntBASIC6.35□□□□□ -1.39
PDGFRAP16234 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.35□□□□□ -1.39
PDGFRAP16234 CCDC11P1-201ENST00000503137 1162 ntBASIC6.35□□□□□ -1.39
PDGFRAP16234 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.35□□□□□ -1.39
PDGFRAP16234 OR56A7P-201ENST00000524865 941 ntBASIC6.35□□□□□ -1.39
PDGFRAP16234 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.35□□□□□ -1.39
PDGFRAP16234 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.35□□□□□ -1.39
PDGFRAP16234 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFRAP16234 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFRAP16234 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFRAP16234 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFRAP16234 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.35□□□□□ -1.39
PDGFRAP16234 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
PDGFRAP16234 AL645933.2-201ENST00000606743 1207 ntBASIC6.35□□□□□ -1.39
PDGFRAP16234 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFRAP16234 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFRAP16234 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PDGFRAP16234 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFRAP16234 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFRAP16234 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFRAP16234 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.35□□□□□ -1.39
PDGFRAP16234 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFRAP16234 HSPD1P9-201ENST00000420325 1636 ntBASIC6.35□□□□□ -1.39
PDGFRAP16234 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
PDGFRAP16234 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFRAP16234 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PDGFRAP16234 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFRAP16234 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFRAP16234 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PDGFRAP16234 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.35□□□□□ -1.39
PDGFRAP16234 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.34□□□□□ -1.39
PDGFRAP16234 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.39
PDGFRAP16234 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.34□□□□□ -1.39
PDGFRAP16234 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.34□□□□□ -1.39
PDGFRAP16234 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
PDGFRAP16234 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
PDGFRAP16234 AL354854.1-201ENST00000455940 1363 ntBASIC6.34□□□□□ -1.39
PDGFRAP16234 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFRAP16234 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
PDGFRAP16234 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
PDGFRAP16234 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFRAP16234 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFRAP16234 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFRAP16234 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFRAP16234 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
PDGFRAP16234 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PDGFRAP16234 COX6B1P3-201ENST00000312310 260 ntBASIC6.34□□□□□ -1.39
PDGFRAP16234 AL451142.1-201ENST00000375867 775 ntBASIC6.34□□□□□ -1.39
PDGFRAP16234 SNORA51.9-201ENST00000384295 124 ntBASIC6.34□□□□□ -1.39
PDGFRAP16234 RN7SKP240-201ENST00000410583 375 ntBASIC6.34□□□□□ -1.39
PDGFRAP16234 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.34□□□□□ -1.39
PDGFRAP16234 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.34□□□□□ -1.39
PDGFRAP16234 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFRAP16234 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFRAP16234 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFRAP16234 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.34□□□□□ -1.39
PDGFRAP16234 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFRAP16234 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFRAP16234 RPL6P30-201ENST00000443382 862 ntBASIC6.34□□□□□ -1.39
PDGFRAP16234 FTLP8-201ENST00000446770 267 ntBASIC6.34□□□□□ -1.39
PDGFRAP16234 AC097463.1-201ENST00000447288 481 ntBASIC6.34□□□□□ -1.39
PDGFRAP16234 RNU7-157P-201ENST00000459600 66 ntBASIC6.34□□□□□ -1.39
PDGFRAP16234 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms