Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AL034374.2-201ENST00000605281 548 ntBASIC5.67□□□□□ -1.5
SCN2BO60939 uc_338.26-201ENST00000612659 160 ntBASIC5.67□□□□□ -1.5
SCN2BO60939 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.67□□□□□ -1.5
SCN2BO60939 MIR6823-201ENST00000622118 61 ntBASIC5.67□□□□□ -1.5
SCN2BO60939 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.67□□□□□ -1.5
SCN2BO60939 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN2BO60939 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.67□□□□□ -1.5
SCN2BO60939 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCN2BO60939 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN2BO60939 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN2BO60939 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCN2BO60939 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN2BO60939 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SCN2BO60939 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SCN2BO60939 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN2BO60939 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN2BO60939 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN2BO60939 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN2BO60939 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN2BO60939 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN2BO60939 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN2BO60939 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN2BO60939 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN2BO60939 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN2BO60939 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SCN2BO60939 NLRP3P1-201ENST00000622303 1785 ntBASIC5.66□□□□□ -1.5
SCN2BO60939 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
SCN2BO60939 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN2BO60939 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SCN2BO60939 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN2BO60939 RN7SKP128-201ENST00000364270 303 ntBASIC5.66□□□□□ -1.5
SCN2BO60939 RNA5SP211-201ENST00000365516 117 ntBASIC5.66□□□□□ -1.5
SCN2BO60939 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SCN2BO60939 RNA5SP156-201ENST00000410250 110 ntBASIC5.66□□□□□ -1.5
SCN2BO60939 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN2BO60939 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN2BO60939 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.66□□□□□ -1.5
SCN2BO60939 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN2BO60939 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN2BO60939 AC016027.4-201ENST00000450866 277 ntBASIC5.66□□□□□ -1.5
SCN2BO60939 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.66□□□□□ -1.5
SCN2BO60939 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN2BO60939 AC012123.2-201ENST00000485809 248 ntBASIC5.66□□□□□ -1.5
SCN2BO60939 RPL12P30-201ENST00000488389 499 ntBASIC5.66□□□□□ -1.5
SCN2BO60939 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SCN2BO60939 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN2BO60939 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN2BO60939 ST13P12-201ENST00000508958 1094 ntBASIC5.66□□□□□ -1.5
SCN2BO60939 CR383658.1-201ENST00000514609 734 ntBASIC5.66□□□□□ -1.5
SCN2BO60939 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN2BO60939 RNU6-964P-201ENST00000516524 69 ntBASIC5.66□□□□□ -1.5
SCN2BO60939 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN2BO60939 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN2BO60939 AC126615.2-201ENST00000553003 515 ntBASIC5.66□□□□□ -1.5
SCN2BO60939 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN2BO60939 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN2BO60939 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN2BO60939 NDUFB9P1-201ENST00000604683 510 ntBASIC5.66□□□□□ -1.5
SCN2BO60939 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN2BO60939 MIR6813-201ENST00000621638 56 ntBASIC5.66□□□□□ -1.5
SCN2BO60939 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN2BO60939 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN2BO60939 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN2BO60939 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN2BO60939 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
SCN2BO60939 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN2BO60939 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN2BO60939 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN2BO60939 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN2BO60939 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SCN2BO60939 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.65□□□□□ -1.5
SCN2BO60939 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCN2BO60939 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
SCN2BO60939 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCN2BO60939 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.65□□□□□ -1.5
SCN2BO60939 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SCN2BO60939 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SCN2BO60939 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SCN2BO60939 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCN2BO60939 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SCN2BO60939 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
SCN2BO60939 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCN2BO60939 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SCN2BO60939 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SCN2BO60939 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
SCN2BO60939 U3.10-201ENST00000364459 214 ntBASIC5.65□□□□□ -1.5
SCN2BO60939 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SCN2BO60939 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.65□□□□□ -1.5
SCN2BO60939 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.65□□□□□ -1.5
SCN2BO60939 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.65□□□□□ -1.5
SCN2BO60939 RPL7AP14-201ENST00000424041 802 ntBASIC5.65□□□□□ -1.5
SCN2BO60939 LINC00328-2P-201ENST00000436585 219 ntBASIC5.65□□□□□ -1.5
SCN2BO60939 AC010086.1-201ENST00000437359 1052 ntBASIC5.65□□□□□ -1.5
SCN2BO60939 RPS12P17-201ENST00000438591 377 ntBASIC5.65□□□□□ -1.5
SCN2BO60939 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.65□□□□□ -1.5
SCN2BO60939 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.65□□□□□ -1.5
SCN2BO60939 KF459542.1-201ENST00000450908 553 ntBASIC5.65□□□□□ -1.5
SCN2BO60939 RSU1P1-201ENST00000453416 441 ntBASIC5.65□□□□□ -1.5
SCN2BO60939 AC044810.1-201ENST00000480271 711 ntBASIC5.65□□□□□ -1.5
SCN2BO60939 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms