Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM38O00635 AC020658.2-201ENST00000559030 4020 ntBASIC6.44□□□□□ -1.38
TRIM38O00635 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM38O00635 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
TRIM38O00635 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM38O00635 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM38O00635 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
TRIM38O00635 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM38O00635 AC005332.9-201ENST00000620266 2921 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM38O00635 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.43□□□□□ -1.38
TRIM38O00635 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM38O00635 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM38O00635 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
TRIM38O00635 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM38O00635 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM38O00635 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
TRIM38O00635 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM38O00635 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM38O00635 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM38O00635 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM38O00635 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM38O00635 AC092642.1-201ENST00000392417 425 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM38O00635 RN7SKP296-201ENST00000411185 341 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 CDY17P-201ENST00000414121 1282 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM38O00635 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM38O00635 AC083862.1-201ENST00000427378 1242 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 CDY8P-201ENST00000428380 1279 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 MTND4LP7-201ENST00000431728 294 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 AC069154.1-201ENST00000432914 542 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM38O00635 AC110602.1-201ENST00000437414 318 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 CDY20P-201ENST00000447528 1279 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM38O00635 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM38O00635 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM38O00635 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM38O00635 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM38O00635 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM38O00635 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM38O00635 MTND1P36-201ENST00000522384 936 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 AC021269.1-201ENST00000526860 705 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 AP001804.1-201ENST00000526868 919 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM38O00635 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM38O00635 AC008147.3-201ENST00000548666 354 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 AC005632.2-201ENST00000564271 828 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM38O00635 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM38O00635 AC002310.3-201ENST00000569728 723 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM38O00635 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM38O00635 AC124916.2-201ENST00000604416 224 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 AC012213.4-201ENST00000606457 354 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 AL592494.3-201ENST00000609485 464 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 AC015922.4-201ENST00000612568 690 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM38O00635 AL137246.2-201ENST00000613439 662 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 AP000577.1-201ENST00000624366 878 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM38O00635 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
TRIM38O00635 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM38O00635 QRSL1P1-201ENST00000400977 1540 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM38O00635 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM38O00635 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM38O00635 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
TRIM38O00635 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM38O00635 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM38O00635 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM38O00635 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM38O00635 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
TRIM38O00635 AC119674.1-213ENST00000641177 1386 ntBASIC6.43□□□□□ -1.38
TRIM38O00635 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TRIM38O00635 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM38O00635 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
TRIM38O00635 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM38O00635 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM38O00635 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM38O00635 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM38O00635 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM38O00635 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM38O00635 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM38O00635 SNORD8-201ENST00000363915 110 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM38O00635 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM38O00635 AL451046.1-201ENST00000406097 534 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM38O00635 AL035422.1-201ENST00000414193 397 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM38O00635 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.42□□□□□ -1.38
TRIM38O00635 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM38O00635 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM38O00635 AC097721.1-201ENST00000427150 1253 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM38O00635 AP000949.1-201ENST00000438328 629 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
TRIM38O00635 Z99127.2-201ENST00000441426 334 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms