Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 CYCSP38-201ENST00000559840 322 ntBASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC020916.2-201ENST00000591242 360 ntBASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AL365181.4-201ENST00000609800 547 ntBASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC010998.3-201ENST00000613871 631 ntBASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AL096712.1-201ENST00000614561 159 ntBASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC129778.1-202ENST00000623812 261 ntBASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AL591379.1-207ENST00000635982 261 ntBASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC092724.1-201ENST00000624623 3397 ntBASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 EIF3EP1-201ENST00000433978 1316 ntBASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 MSL3P1-202ENST00000440028 1468 ntBASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 MTCO1P28-201ENST00000574177 1528 ntBASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TCRBV4S1A1TA0A5B7 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC018628.1-201ENST00000624147 3819 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC123769.1-201ENST00000530992 3192 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC097634.1-201ENST00000604491 2467 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC023490.2-201ENST00000359859 470 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 RNU1-134P-201ENST00000362935 165 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 SNORA51.9-201ENST00000384295 124 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 RPL12P16-201ENST00000431098 498 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AL731534.1-201ENST00000434711 269 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AL353662.1-201ENST00000439099 327 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 REG1CP-206ENST00000447469 496 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 PPIAP27-201ENST00000453800 265 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 snoU13.29-201ENST00000459370 104 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC073594.1-201ENST00000462065 364 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 LSM3P4-201ENST00000502948 309 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 LDHAP1-201ENST00000509421 992 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC090958.1-201ENST00000511122 351 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 RN7SKP238-201ENST00000516483 249 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 Y_RNA.710-201ENST00000516975 110 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC079905.1-201ENST00000549280 475 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 MIR132-201ENST00000591554 101 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC004801.6-201ENST00000616571 978 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC005899.7-201ENST00000618199 588 ntBASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TCRBV4S1A1TA0A5B7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
TCRBV4S1A1TA0A5B7 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TCRBV4S1A1TA0A5B7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TCRBV4S1A1TA0A5B7 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.85□□□□□ -1.63
TCRBV4S1A1TA0A5B7 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.85□□□□□ -1.63
TCRBV4S1A1TA0A5B7 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TCRBV4S1A1TA0A5B7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
TCRBV4S1A1TA0A5B7 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
TCRBV4S1A1TA0A5B7 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TCRBV4S1A1TA0A5B7 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
TCRBV4S1A1TA0A5B7 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TCRBV4S1A1TA0A5B7 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
TCRBV4S1A1TA0A5B7 RNA5SP435-201ENST00000364044 108 ntBASIC4.85□□□□□ -1.63
TCRBV4S1A1TA0A5B7 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms