Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC090181.3-201ENST00000624777 1514 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AL359715.4-201ENST00000606629 1436 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 AC005332.9-201ENST00000620266 2921 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 AC003973.3-201ENST00000624863 2822 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 RPL5P20-201ENST00000403848 896 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 RPS21P8-201ENST00000413365 247 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 RPL36P18-201ENST00000419316 318 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 AL451136.1-201ENST00000435399 325 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 RN7SL205P-201ENST00000490174 284 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 RPL19P11-201ENST00000495944 589 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 AC131392.1-201ENST00000506490 633 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 C1GALT1P2-201ENST00000510813 1104 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 HMGN1P17-201ENST00000513734 295 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 MTND5P21-201ENST00000531961 522 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 RPL3P13-201ENST00000550415 216 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 AC023158.1-201ENST00000561632 1025 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 PRELID3BP3-201ENST00000584963 545 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 AL391001.1-201ENST00000602747 715 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 AL683813.2-201ENST00000605245 502 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 AL731556.1-201ENST00000394628 3711 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 AC073342.2-201ENST00000595842 1800 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 SMG1P5-202ENST00000529428 4219 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 SMG1P2-201ENST00000566127 4221 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 CASC19-243ENST00000641588 1546 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 AC005702.3-201ENST00000585345 1447 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 AC007342.7-201ENST00000624610 2337 ntBASIC7.26□□□□□ -1.25
COL4A3BPQ9Y5P4 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 PPBPP2-201ENST00000513150 1362 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 RN7SKP171-201ENST00000364417 303 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AL050335.1-201ENST00000396909 869 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 RNU2-22P-201ENST00000411266 212 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AL158827.1-201ENST00000416300 391 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 MTND2P15-201ENST00000418575 892 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AL606495.1-201ENST00000422100 813 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 RPSAP32-201ENST00000432681 526 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC003989.1-201ENST00000434569 565 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 RBMY2TP-201ENST00000451162 947 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 HNRNPDLP3-201ENST00000456745 380 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC092824.1-201ENST00000483524 576 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 RPL5P14-201ENST00000494197 878 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 RN7SL649P-201ENST00000496974 275 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 AC108120.2-201ENST00000512973 294 ntBASIC7.25□□□□□ -1.25
COL4A3BPQ9Y5P4 MTATP6P9-201ENST00000515039 680 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms