Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RNA5SP350-201ENST00000363298 111 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 RNU6-1251P-201ENST00000364502 107 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 PRELID1P1-201ENST00000403549 660 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AL023284.3-201ENST00000407767 334 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 RPS3AP25-201ENST00000411660 793 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 OR13Z1P-201ENST00000416141 834 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 NAP1L4P2-201ENST00000425958 899 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AC013262.1-201ENST00000426710 252 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 HMGN1P2-201ENST00000445197 310 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AL627224.1-201ENST00000448334 444 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 CCRL1P1-201ENST00000449542 1053 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 MGAT2P1-201ENST00000449718 797 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 RARRES2P3-201ENST00000457739 473 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 RPL32P14-201ENST00000463196 378 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 H3F3AP3-201ENST00000497682 407 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 HMGN1P17-201ENST00000513734 295 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AC026407.1-201ENST00000518369 204 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AC104115.2-201ENST00000523026 687 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AC124891.1-201ENST00000536322 519 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 RN7SL753P-201ENST00000581238 290 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AC005726.4-201ENST00000582858 458 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AL157899.1-201ENST00000604110 936 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AC010325.3-201ENST00000641084 394 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AC010624.4-201ENST00000597606 1351 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 AP000866.6-201ENST00000638898 3579 ntBASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB1Q9Y5F3 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 AC005332.9-201ENST00000620266 2921 ntBASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 AL645568.2-201ENST00000432815 1337 ntBASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 DOCK11P1-201ENST00000553480 5932 ntBASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 SNORD65-201ENST00000391079 73 ntBASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 CYCSP52-201ENST00000422857 310 ntBASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 AL645939.3-201ENST00000435408 225 ntBASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 GAPDHP59-201ENST00000435908 267 ntBASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 AC092473.1-201ENST00000441098 221 ntBASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 POU5F1P5-201ENST00000445059 658 ntBASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 RN7SL205P-201ENST00000490174 284 ntBASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 AC006512.2-201ENST00000543250 486 ntBASIC6.53□□□□□ -1.36
PCDHB1Q9Y5F3 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms