Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 PTCD2P2-201ENST00000415579 1095 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 RPL12P16-201ENST00000431098 498 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AC094019.1-201ENST00000434678 472 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AL356121.1-201ENST00000442911 156 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 GAPDHP23-201ENST00000444823 993 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AC004890.1-201ENST00000461005 181 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 RPS7P10-201ENST00000464254 603 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 RN7SL104P-201ENST00000498686 293 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 SNX18P24-201ENST00000505249 671 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 NACAP5-201ENST00000509863 636 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 MRPS5P3-201ENST00000515577 166 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 Y_RNA.710-201ENST00000516975 110 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 MIR132-201ENST00000591554 101 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AC011891.2-201ENST00000604949 397 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AL137067.2-201ENST00000621202 131 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 MIR6823-201ENST00000622118 61 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 MAPK10-350ENST00000641777 965 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 AL359091.1-201ENST00000449048 1734 ntBASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 SNORA77.2-201ENST00000408571 112 ntBASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 RN7SKP38-201ENST00000410782 309 ntBASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 IGLV3-4-201ENST00000432300 244 ntBASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 LINC00328-2P-201ENST00000436585 219 ntBASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 HIGD1AP16-201ENST00000450986 258 ntBASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 OR2A3P-201ENST00000493774 953 ntBASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 SNORA74.1-201ENST00000516320 180 ntBASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 NPM1P5-201ENST00000557228 838 ntBASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 NPM1P42-201ENST00000560329 862 ntBASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 AC005632.2-201ENST00000564271 828 ntBASIC5.31□□□□□ -1.56
RHBDD3Q9Y3P4 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms