Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 LDHBP2-201ENST00000456969 1005 ntBASIC6.51□□□□□ -1.37
DKK3Q9UBP4 RN7SL170P-201ENST00000487098 295 ntBASIC6.51□□□□□ -1.37
DKK3Q9UBP4 RPL37P23-201ENST00000492641 294 ntBASIC6.51□□□□□ -1.37
DKK3Q9UBP4 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.51□□□□□ -1.37
DKK3Q9UBP4 HMGN1P16-201ENST00000508308 283 ntBASIC6.51□□□□□ -1.37
DKK3Q9UBP4 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.51□□□□□ -1.37
DKK3Q9UBP4 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.51□□□□□ -1.37
DKK3Q9UBP4 AC093816.1-201ENST00000515076 913 ntBASIC6.51□□□□□ -1.37
DKK3Q9UBP4 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.51□□□□□ -1.37
DKK3Q9UBP4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.51□□□□□ -1.37
DKK3Q9UBP4 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.51□□□□□ -1.37
DKK3Q9UBP4 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.51□□□□□ -1.37
DKK3Q9UBP4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.51□□□□□ -1.37
DKK3Q9UBP4 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.51□□□□□ -1.37
DKK3Q9UBP4 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.51□□□□□ -1.37
DKK3Q9UBP4 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.51□□□□□ -1.37
DKK3Q9UBP4 AC073862.4-201ENST00000622982 854 ntBASIC6.51□□□□□ -1.37
DKK3Q9UBP4 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.51□□□□□ -1.37
DKK3Q9UBP4 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.51□□□□□ -1.37
DKK3Q9UBP4 RNF19BPY-201ENST00000458209 1550 ntBASIC6.51□□□□□ -1.37
DKK3Q9UBP4 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
DKK3Q9UBP4 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
DKK3Q9UBP4 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.51□□□□□ -1.37
DKK3Q9UBP4 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 RN7SKP15-201ENST00000364742 309 ntBASIC6.5□□□□□ -1.37
DKK3Q9UBP4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 RBBP4P5-201ENST00000398583 1266 ntBASIC6.5□□□□□ -1.37
DKK3Q9UBP4 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AC009963.4-201ENST00000448535 339 ntBASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AC118758.1-202ENST00000454719 225 ntBASIC6.5□□□□□ -1.37
DKK3Q9UBP4 CTSLP6-201ENST00000458273 1002 ntBASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 RPS27P20-201ENST00000492051 246 ntBASIC6.5□□□□□ -1.37
DKK3Q9UBP4 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.5□□□□□ -1.37
DKK3Q9UBP4 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AP000662.1-201ENST00000530952 487 ntBASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AC008055.1-201ENST00000547032 609 ntBASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 SNORA74.4-201ENST00000607595 199 ntBASIC6.5□□□□□ -1.37
DKK3Q9UBP4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AL122023.1-201ENST00000622847 530 ntBASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AC073593.1-201ENST00000624500 411 ntBASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AL121936.2-201ENST00000641935 662 ntBASIC6.5□□□□□ -1.37
DKK3Q9UBP4 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AC125238.2-201ENST00000430003 1440 ntBASIC6.5□□□□□ -1.37
DKK3Q9UBP4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 NEK2P2-201ENST00000438441 1338 ntBASIC6.5□□□□□ -1.37
DKK3Q9UBP4 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
DKK3Q9UBP4 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.49□□□□□ -1.37
DKK3Q9UBP4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.49□□□□□ -1.37
DKK3Q9UBP4 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
DKK3Q9UBP4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
DKK3Q9UBP4 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.49□□□□□ -1.37
DKK3Q9UBP4 AL353743.3-201ENST00000442109 1468 ntBASIC6.49□□□□□ -1.37
DKK3Q9UBP4 AL391261.1-201ENST00000555712 1479 ntBASIC6.49□□□□□ -1.37
DKK3Q9UBP4 AC005261.6-201ENST00000623072 1387 ntBASIC6.49□□□□□ -1.37
DKK3Q9UBP4 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
DKK3Q9UBP4 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
DKK3Q9UBP4 RNA5SP77-201ENST00000365394 120 ntBASIC6.49□□□□□ -1.37
DKK3Q9UBP4 SNORA70.9-201ENST00000384370 135 ntBASIC6.49□□□□□ -1.37
DKK3Q9UBP4 YWHAZP4-201ENST00000392459 708 ntBASIC6.49□□□□□ -1.37
DKK3Q9UBP4 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
DKK3Q9UBP4 NPM1P37-201ENST00000403105 874 ntBASIC6.49□□□□□ -1.37
DKK3Q9UBP4 RSL24D1P1-201ENST00000404972 493 ntBASIC6.49□□□□□ -1.37
DKK3Q9UBP4 AL445528.1-201ENST00000426330 420 ntBASIC6.49□□□□□ -1.37
DKK3Q9UBP4 RPSAP32-201ENST00000432681 526 ntBASIC6.49□□□□□ -1.37
DKK3Q9UBP4 AL691517.1-201ENST00000440833 1235 ntBASIC6.49□□□□□ -1.37
DKK3Q9UBP4 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.49□□□□□ -1.37
DKK3Q9UBP4 TIMM8BP2-201ENST00000445940 251 ntBASIC6.49□□□□□ -1.37
DKK3Q9UBP4 COX4I1P2-201ENST00000447446 547 ntBASIC6.49□□□□□ -1.37
DKK3Q9UBP4 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.49□□□□□ -1.37
DKK3Q9UBP4 AC098826.2-201ENST00000452011 651 ntBASIC6.49□□□□□ -1.37
DKK3Q9UBP4 MARK2P8-201ENST00000476069 952 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms