Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC020549.1-201ENST00000536916 1440 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 MAPK10-354ENST00000641823 2732 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 OR1J4-201ENST00000340750 942 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 RNY4P14-201ENST00000363656 96 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 Y_RNA.295-201ENST00000364918 102 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 RNA5SP355-201ENST00000365317 135 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 RN7SKP208-201ENST00000365474 361 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 CST13P-201ENST00000376992 428 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC133644.1-201ENST00000398171 937 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 OR4F7P-201ENST00000402444 931 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 OR4F1P-201ENST00000405102 938 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 LSM5-202ENST00000409292 538 ntTSL 2 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC006065.1-201ENST00000422539 802 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 OR4F2P-201ENST00000424047 938 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 EEF1A1P27-201ENST00000429983 1135 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 PA2G4P6-201ENST00000438325 1197 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AL929410.2-201ENST00000451170 189 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC091959.2-201ENST00000477363 321 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC079841.1-201ENST00000481228 950 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AL355076.1-201ENST00000484315 270 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 RPL7AP26-201ENST00000488538 813 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC106760.2-201ENST00000504159 619 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 HSPE1P23-201ENST00000509838 286 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC113191.1-201ENST00000517759 403 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 MRPL40P1-201ENST00000542687 604 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 IGHV1OR15-4-201ENST00000560037 348 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC007151.1-201ENST00000572774 483 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 SNORD39.2-201ENST00000579995 76 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AL135999.3-201ENST00000610501 812 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AL122125.1-201ENST00000616999 600 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC008121.3-201ENST00000618726 433 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC022509.4-201ENST00000621404 572 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC025287.2-201ENST00000621911 668 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AC134981.1-201ENST00000628076 348 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms