Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC5.56□□□□□ -1.52
CHD8Q9HCK8 AC002090.1-201ENST00000625000 2138 ntBASIC5.56□□□□□ -1.52
CHD8Q9HCK8 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 MGC15885-201ENST00000558940 2425 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 AP005139.1-201ENST00000580702 1647 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 CYCSP10-201ENST00000417973 294 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 RPL37AP8-201ENST00000494116 276 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 AC112225.1-201ENST00000508230 297 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 OR9L1P-201ENST00000529493 933 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 TXNP4-201ENST00000575018 310 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 MIR4675-201ENST00000577898 77 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 AL137067.2-201ENST00000621202 131 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 AC131009.3-201ENST00000621809 287 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 AC105342.1-201ENST00000378334 6848 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 AC025809.2-201ENST00000625085 1802 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 AC025750.1-201ENST00000399891 379 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 SNORA11.1-201ENST00000408133 129 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 CDC27P1-201ENST00000445384 715 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 AC026402.1-201ENST00000513642 170 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 IGKV2D-10-201ENST00000520194 281 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 MRPS16P1-201ENST00000523462 412 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.55□□□□□ -1.52
CHD8Q9HCK8 AC099654.6-201ENST00000636487 512 ntBASIC5.55□□□□□ -1.52
CHD8Q9HCK8 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 HYDIN2-203ENST00000614586 13885 ntBASIC5.54□□□□□ -1.52
CHD8Q9HCK8 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 HSPA8P14-201ENST00000552265 1805 ntBASIC5.54□□□□□ -1.52
CHD8Q9HCK8 FLJ42393-201ENST00000623801 2270 ntBASIC5.54□□□□□ -1.52
CHD8Q9HCK8 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 AL450023.1-201ENST00000450868 751 ntBASIC5.54□□□□□ -1.52
CHD8Q9HCK8 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.54□□□□□ -1.52
CHD8Q9HCK8 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms