Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.36□□□□□ -1.55
SSX3Q99909 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.36□□□□□ -1.55
SSX3Q99909 AL591135.1-201ENST00000401578 5914 ntBASIC5.36□□□□□ -1.55
SSX3Q99909 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SSX3Q99909 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SSX3Q99909 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX3Q99909 AC096992.2-201ENST00000609553 1684 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSX3Q99909 MTCO1P8-201ENST00000416914 1523 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX3Q99909 AC119674.1-213ENST00000641177 1386 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX3Q99909 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSX3Q99909 AC092451.3-201ENST00000625067 1343 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SSX3Q99909 PPIAP24-201ENST00000328558 471 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX3Q99909 RN7SKP81-201ENST00000365603 331 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX3Q99909 U3.52-201ENST00000384034 216 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 AL133260.1-201ENST00000405720 405 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 RPL12P23-201ENST00000405880 490 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 RN7SKP188-201ENST00000410789 317 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 AL929472.1-201ENST00000417484 429 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.35□□□□□ -1.55
SSX3Q99909 OR6R1P-201ENST00000431838 940 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 AC245452.2-201ENST00000435222 392 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SSX3Q99909 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.35□□□□□ -1.55
SSX3Q99909 GAPDHP33-201ENST00000443168 1013 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX3Q99909 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.35□□□□□ -1.55
SSX3Q99909 RPL29P23-201ENST00000486188 442 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.35□□□□□ -1.55
SSX3Q99909 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSX3Q99909 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX3Q99909 AC116917.1-201ENST00000520558 305 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.35□□□□□ -1.55
SSX3Q99909 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.35□□□□□ -1.55
SSX3Q99909 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.35□□□□□ -1.55
SSX3Q99909 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC5.35□□□□□ -1.55
SSX3Q99909 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.35□□□□□ -1.55
SSX3Q99909 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.35□□□□□ -1.55
SSX3Q99909 AC011921.2-201ENST00000589465 152 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 AL049840.5-201ENST00000602827 552 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 NDUFB9P1-201ENST00000604683 510 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 AC114477.1-201ENST00000605097 605 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 AC093635.1-201ENST00000609028 555 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX3Q99909 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX3Q99909 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX3Q99909 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX3Q99909 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX3Q99909 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX3Q99909 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSX3Q99909 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSX3Q99909 AC133552.1-201ENST00000569988 4007 ntBASIC5.35□□□□□ -1.55
SSX3Q99909 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.35□□□□□ -1.55
SSX3Q99909 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.35□□□□□ -1.55
SSX3Q99909 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.35□□□□□ -1.55
SSX3Q99909 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.35□□□□□ -1.55
SSX3Q99909 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX3Q99909 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX3Q99909 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SSX3Q99909 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.35□□□□□ -1.55
SSX3Q99909 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.34□□□□□ -1.55
SSX3Q99909 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX3Q99909 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX3Q99909 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX3Q99909 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
SSX3Q99909 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX3Q99909 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SSX3Q99909 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSX3Q99909 RNA5SP350-201ENST00000363298 111 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 RNA5SP279-201ENST00000365513 117 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SSX3Q99909 LCN1P2-201ENST00000372030 223 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 AL049697.3-201ENST00000406493 982 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 AC002524.1-201ENST00000411687 547 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 HMGA1P8-201ENST00000414130 321 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX3Q99909 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX3Q99909 RPL7AP51-201ENST00000422016 760 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 AC007568.1-201ENST00000422912 471 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 AC010086.1-201ENST00000437359 1052 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 COL11A2P1-205ENST00000441798 676 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.34□□□□□ -1.55
SSX3Q99909 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.34□□□□□ -1.55
SSX3Q99909 snoU13.29-201ENST00000459370 104 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 AC098818.1-201ENST00000478593 252 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SSX3Q99909 RN7SL649P-201ENST00000496974 275 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 OR52A4P-203ENST00000498233 1014 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 SNORA58-201ENST00000505219 137 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.34□□□□□ -1.55
SSX3Q99909 UGT2A3P7-201ENST00000510485 734 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX3Q99909 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX3Q99909 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms