Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 Z68868.1-201ENST00000429048 544 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 AL512637.2-201ENST00000431287 1256 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 AL590128.1-201ENST00000433407 286 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 AC006326.1-201ENST00000445465 787 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 AL139824.2-201ENST00000458731 1095 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 RN7SL390P-201ENST00000470634 284 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 RPS3AP15-201ENST00000483874 781 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 RN7SL655P-201ENST00000486087 298 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 OR9N1P-202ENST00000494289 481 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 AC105233.1-201ENST00000498840 781 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 Y_RNA.717-201ENST00000517106 92 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 SNRPCP6-201ENST00000528310 210 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 PPIAP6-201ENST00000557078 499 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 AC084759.1-201ENST00000561168 290 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 MIR4312-201ENST00000579909 76 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 RN7SL66P-201ENST00000582099 264 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 DIMT1P1-201ENST00000603970 763 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 AL121652.1-201ENST00000608851 448 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 AC073342.3-201ENST00000624211 193 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 OR8A1-204ENST00000642111 1145 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX18Q96RF0 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX18Q96RF0 AL645568.2-201ENST00000432815 1337 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX18Q96RF0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX18Q96RF0 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX18Q96RF0 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX18Q96RF0 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX18Q96RF0 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX18Q96RF0 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC004023.1-201ENST00000561473 1744 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX18Q96RF0 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX18Q96RF0 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX18Q96RF0 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX18Q96RF0 RN7SKP189-201ENST00000365042 330 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 UBBP1-201ENST00000392399 473 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 CXADRP1-201ENST00000398098 1095 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX18Q96RF0 RNA5SP115-201ENST00000411160 107 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC098592.2-201ENST00000413158 265 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 SSR1P2-201ENST00000415208 787 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC009506.2-201ENST00000420635 840 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 ETF1P1-206ENST00000427296 984 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 RPL3P11-201ENST00000434028 1146 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 HMGN1P32-201ENST00000441744 256 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 AL845321.1-201ENST00000444603 348 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 MOB1AP2-201ENST00000446060 614 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX18Q96RF0 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 RPL7AP23-201ENST00000482625 776 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC114728.1-201ENST00000488289 483 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 FABP5P6-201ENST00000510588 409 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX18Q96RF0 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms