Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SNRPCP3-201ENST00000474888 476 ntBASIC5.7□□□□□ -1.5
COL21A1Q96P44 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 AC122718.2-201ENST00000505325 591 ntBASIC5.7□□□□□ -1.5
COL21A1Q96P44 AC091874.2-201ENST00000505889 720 ntBASIC5.7□□□□□ -1.5
COL21A1Q96P44 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 NPM1P5-201ENST00000557228 838 ntBASIC5.7□□□□□ -1.5
COL21A1Q96P44 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 AC002519.2-203ENST00000567043 837 ntBASIC5.7□□□□□ -1.5
COL21A1Q96P44 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 AC025857.2-201ENST00000602711 238 ntBASIC5.7□□□□□ -1.5
COL21A1Q96P44 AL080312.2-201ENST00000613001 630 ntBASIC5.7□□□□□ -1.5
COL21A1Q96P44 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 AL596275.2-207ENST00000641188 675 ntBASIC5.7□□□□□ -1.5
COL21A1Q96P44 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 AL359955.1-201ENST00000455242 3275 ntBASIC5.7□□□□□ -1.5
COL21A1Q96P44 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL21A1Q96P44 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL21A1Q96P44 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 EIF3EP1-201ENST00000433978 1316 ntBASIC5.7□□□□□ -1.5
COL21A1Q96P44 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL21A1Q96P44 NLRP3P1-201ENST00000622303 1785 ntBASIC5.7□□□□□ -1.5
COL21A1Q96P44 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 AC232271.1-201ENST00000602455 2715 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL21A1Q96P44 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL21A1Q96P44 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 RNA5SP375-201ENST00000362975 119 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 RN7SKP108-201ENST00000411367 328 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 RPS7P8-201ENST00000418311 581 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 AL354893.1-201ENST00000433735 348 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 KRT8P51-201ENST00000438938 274 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 AC124945.1-201ENST00000485133 188 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 AC021006.1-201ENST00000489849 553 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 RN7SL649P-201ENST00000496974 275 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 AC018797.1-201ENST00000510791 255 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 AC136777.2-201ENST00000522979 358 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 OR1E3-201ENST00000575608 948 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 AC008555.7-201ENST00000605008 583 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 AC141002.1-201ENST00000607025 279 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 AC073389.3-201ENST00000609434 935 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 RN7SL261P-201ENST00000613441 282 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 AP001052.1-201ENST00000626421 99 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 AC073488.6-201ENST00000632293 754 ntBASIC5.69□□□□□ -1.5
COL21A1Q96P44 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL21A1Q96P44 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL21A1Q96P44 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL21A1Q96P44 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL21A1Q96P44 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL21A1Q96P44 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL21A1Q96P44 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
COL21A1Q96P44 AC011416.1-201ENST00000514947 1732 ntBASIC5.68□□□□□ -1.5
COL21A1Q96P44 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL21A1Q96P44 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL21A1Q96P44 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL21A1Q96P44 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL21A1Q96P44 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL21A1Q96P44 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL21A1Q96P44 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL21A1Q96P44 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL21A1Q96P44 CAP1P2-201ENST00000417455 1409 ntBASIC5.68□□□□□ -1.5
COL21A1Q96P44 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL21A1Q96P44 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 MIR1275-201ENST00000408770 80 ntBASIC5.68□□□□□ -1.5
COL21A1Q96P44 RNA5SP156-201ENST00000410250 110 ntBASIC5.68□□□□□ -1.5
COL21A1Q96P44 AC130360.1-201ENST00000425489 1117 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms